Arthrobacter sulfonylureivorans: MNQ99_00735
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Entry
MNQ99_00735 CDS
T08235
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
asuf
Arthrobacter sulfonylureivorans
Pathway
asuf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
asuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MNQ99_00735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asuf03400
]
MNQ99_00735
Enzymes [BR:
asuf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MNQ99_00735
DNA repair and recombination proteins [BR:
asuf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MNQ99_00735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
LigD_N
DNA_ligase_A_C
RNA_ligase
DNA_ligase_OB_2
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
UNK45950
LinkDB
All DBs
Position
complement(143630..146173)
Genome browser
AA seq
847 aa
AA seq
DB search
MATRKSSQQETVTVDGHRLRLTNLDKVLYPETGTTKAEVIAYYSEIAEYLIPHAADRPVT
RKRWVHGVGTAAEPGQVFFQKNLDKSAPDWVKRHTIEHKSNSNVYPLANDRATLTWLAQI
AALEIHVPQWKFGPRGKINNPDRMVLDLDPGEGAGLPECVEVAFLIKEILEGMGLDPRPV
TSGSKGIHLYAGLDGKQTSDEVSQVAHELARLLEADRPDLVVSDMKKSLRQGKVLVDWSQ
NNWAKTTIAPYSLRGRPHPTVAVPRTWQELQDPDLTHLDFRQVLERVEQIGDPLSGMAGG
SADEEALAVAPAADRLSVYRSMRDPDRTPEPVPAAVAPREPDQPVFVIQEHHARRLHYDL
RLERNGVLASWAVPKGPPVTAGKNHLAVQTEDHPMEYATFEGTIPKGEYGAGVMAIWDSG
SYDVEKWRDGKEVIVVLHGRPDGGLAHDGGPSGARRYALIHTGGEDGKSNWLMHLMKDQP
QTGTAQGSPAKDKDKDKDTAKGTAGAPATPVSGSAPGSGGTPQPVKPMLAVQGTEASIDE
DDGWAYEMKWDGIRAVAVVAQGEVRLISRNGQDMTKTYPELSDLPDHVLARTAVLDGEIV
ALDAKGRPDFGRLQNRMNLVKTADIERAAKKYPVEYFLFDLLELDGTATLGLEYSQRREI
LKEAVDAPRDGHIQVPPELDAAVAEAVEASREVGLEGIIAKRTDSNYAPGLRTRSWIKIK
NQLTQEVVIVGWRPGKGSRARKVGSLLVAVPDGVELSYLGRVGSGLTERELAEIGSRLKK
MSRKTPPLEGVPAADASDAHWVRPALVGEVQFSERTEAGKLRHPVWRGFRPDKKPSDVVV
EIPQFQP
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggccacccggaaatccagccagcaggagaccgtcaccgtcgacgggcaccggctgcgg
ctcaccaacctggacaaggtgctgtatccggagaccgggaccacgaaggccgaggtcatc
gcctattactccgagatcgccgagtacctgattccgcatgccgccgatcggccggtcacc
cgcaagcgatgggtccacggcgtgggcaccgcggcggaaccgggccaggtgtttttccag
aagaacctggacaagtcggcgcccgactgggtcaagcggcacaccattgaacacaagagc
aatagcaacgtctaccccttggccaatgaccgggccaccctgacctggctggcgcagatt
gccgccttggaaatccacgttccgcaatggaagtttggtccgcgcggcaagatcaacaac
ccggaccggatggtcctggacctggatccgggcgagggcgccgggctgccggagtgtgtt
gaggtggcgttcctgatcaaggagatcctggaggggatgggccttgacccgaggccggtc
acctccggttccaaagggatccacctctacgccgggctggacggcaagcagacgtccgac
gaagtcagccaggtggcccacgaattggcccgcctgctggaggctgaccgcccggacctg
gtggtcagcgacatgaagaagtcgctgcgccagggcaaggtgctggtggactggagccag
aacaactgggccaagaccaccatcgccccctattcgctgcgtggtcggccgcatcccacc
gtggcggtgcccaggacctggcaggaactgcaggatccggacctcacccatctggacttc
cggcaggtgctggagcgggtcgagcagatcggggacccgctctccggcatggccggcggc
agcgccgacgaggaggcgctggccgtggcgccggcggccgaccggctcagcgtctaccgc
tccatgcgcgatccggaccggacacccgaacctgtgccggcggccgtcgcgccacgggag
ccggaccaaccggtcttcgtgatccaggaacaccacgcgcgccgcctgcattacgacctt
cgactggagcgcaacggggtgctggcgtcctgggccgtgcccaagggacctccggtcacg
gcgggcaagaaccatttggccgttcagaccgaggaccacccgatggaatatgccaccttc
gagggcaccatccccaagggcgaatacggcgcaggtgtgatggccatctgggacagcggc
agctatgacgtggagaagtggcgggacggcaaggaagtcatcgtggtgctgcacggccgc
ccggacggggggctcgcgcacgacggcggtccctccggtgcgcgccggtacgccttgatc
cacaccggcggcgaggacggcaagagcaactggttgatgcacctgatgaaggaccagccg
caaaccgggacggcgcagggctcgccggcaaaggacaaggacaaggacaaggacacggcc
aagggaacggccggtgcaccggcgacgccggtcagcggctccgcaccggggagcggtggg
acgccgcagccggtaaaacctatgctggcggtccagggtacggaggcctccatcgacgag
gacgacggctgggcgtacgagatgaagtgggacgggatccgcgccgtcgccgtggtggcg
cagggcgaggtgcgactgatcagccgcaacggccaagacatgaccaagacctacccagag
ctctcagacctgccggatcatgtactggcccggaccgcggtgctggatggcgaaatcgtt
gcgctcgacgccaaggggcggcccgacttcggccggctccaaaaccggatgaacttggtg
aagacggccgatattgagcgggcggcgaaaaaatatccggtggagtatttcctttttgat
ttgctggaattggacggaacggcaacgcttgggctggaatactcccaacggcgcgaaatc
ctcaaggaagcggtggatgcgccccgggacggacacatccaggttccgccggagctggac
gcggccgtggcagaagccgttgaagccagccgggaggttggcctggaggggattattgcc
aagcgcacggacagcaactatgcgccgggcctacggacaaggagttggatcaagatcaag
aaccagctgacccaggaagtggtcattgtgggctggcggccgggtaagggttcccgcgcg
cgcaaagtcggctcgttactggtggctgtgcccgacggcgtggaactgagctaccttggc
cgtgtcggttcaggcctgaccgagcgggaactggccgagatcggatcccggctgaagaag
atgtcccgcaagaccccgccgctggaaggcgtgccggcggcggatgcctcggacgcgcac
tgggtccggcctgccttggtcggcgaggtgcagttcagcgaacgcaccgaggccgggaag
ctgcggcatccggtctggcggggcttccggccggacaagaagccgtcggacgtcgtcgtc
gaaattccgcagttccagccctga
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