Agrobacterium tumefaciens S33: AWN88_16500
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Entry
AWN88_16500 CDS
T04213
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ata
Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ata03000
]
AWN88_16500
Transcription factors [BR:
ata03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AWN88_16500
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_50
HTH_20
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AMD59836
LinkDB
All DBs
Position
linear:1081782..1082711
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AA seq
309 aa
AA seq
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MKMSRQFPLNALRVFEAAARHMSFTKAGEELGMTQTAVSYQVKLLEENIGEPLFIRKARQ
VSLTEAGEKLAPKVAEAFNTLKEAVDSVRDAPDATLTIHSTATFASRWLSRHLGAFQLEH
PSIAVRLDTSSSLIDFSQSDCDVAIRWSKDNGKGLIYHQLLRGVYTPMLHPSLADSIGGL
HRPEDLLRLRIIDPGDIWWSQWFKEVGVENPGLDRYPRSRLNVQAFEAAAAIASQGVAML
TPELYADEIALGRLYQPFEHLSSEGKNYWLVYPENRRNIRKIRLFRDWILKRIEESRPQQ
QPQYPISGA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtcacgccagttccccctgaatgccctgcgggtgttcgaagccgccgcaaga
cacatgagcttcaccaaggccggcgaggaattgggcatgacgcagacggcagtcagctat
caggtgaaactgctggaggagaatatcggagagccgctcttcataagaaaggcgcggcaa
gtctcgctgaccgaggctggagaaaaattagcgccgaaagttgcggaagcctttaatacc
ttaaaggaggctgtcgatagcgtgcgcgacgcgcccgacgcaacgctgacaatccactca
accgccacctttgcgtcgcgctggctttcgcggcatctgggcgctttccagcttgaacat
ccctcaatcgcggtgcggcttgatacatcgagctcactgatcgatttttcccaatcagac
tgcgatgtcgccattcgctggagcaaagataacggtaaagggctgatctaccatcaactg
ctgcgcggcgtttatacgccgatgctgcatccaagtcttgctgacagcatcggcggattg
caccgcccggaagatctgctgcgcctgcgcatcatcgatcccggcgatatctggtggagc
cagtggttcaaggaagtcggcgtcgaaaatccgggcctcgaccgttatccccgcagccgc
ctcaatgtgcaggccttcgaggccgcagcggcgatcgccagccagggcgtcgccatgctc
accccggaactctatgccgatgagattgcgctcggccgcctttatcaacccttcgagcat
ctcagcagcgagggcaagaactattggctggtctaccctgaaaaccgccggaacattcgc
aagataaggctgttccgcgactggattttgaagcggatcgaggaaagccggccgcagcag
cagcctcaataccccatatccggcgcataa
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