Caldicellulosiruptor bescii: Athe_2041
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Entry
Athe_2041 CDS
T00857
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K27000
RNA polymerase sigma-H factor
Organism
ate
Caldicellulosiruptor bescii
Brite
KEGG Orthology (KO) [BR:
ate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ate03021
]
Athe_2041
Transcription machinery [BR:
ate03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Athe_2041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
GerE
Relaxase_C
HTH_38
SMC_Nse1
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACM61118
UniProt:
B9MLC8
LinkDB
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Position
complement(2156467..2157201)
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AA seq
244 aa
AA seq
DB search
MSLKEALAIIYNYCDRFFFEFLTRLKNLRRHIALTLQKWLLNFKECSDEELVKYSREGVK
EALEELLSRYQNFVKAKCRMYFLIGADKEDIYQEGMIGLFKAVRDFDETKYPSFRLFAEM
CITRQMITAIKTASRQKHIPLNTYISLNKPVYEENDERTLIDTLADAFISDPEEVMITKE
ELENAINVITECLSPFEFKVLSLYLEGRSYQEIADMIHKDVKSIDNALQRVKKKIEKYLA
PADK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaaagaagctttagcgataatatataattattgtgataggtttttctttgaa
ttcttaacaaggcttaaaaacttaaggaggcatattgccttgacattacaaaaatggctt
ttgaattttaaagaatgttcagatgaggaattggttaaatattcaagagaaggcgtgaaa
gaagctcttgaggagcttctttcaaggtatcaaaactttgtgaaggcaaagtgcagaatg
tactttttgattggagctgataaggaggatatttatcaagagggtatgataggtcttttt
aaagctgtgcgtgattttgatgaaacaaaatatccttcatttagattgtttgcagagatg
tgcattacacgtcagatgataactgcaatcaaaactgccagcaggcaaaaacatattcct
cttaacacctacatatcacttaacaagcctgtgtacgaagaaaatgacgaaaggacgctt
attgatacgttagcggacgcgttcatttctgacccggaagaggttatgattacaaaggag
gagcttgaaaacgctataaatgttattactgaatgtctttctccttttgagttcaaggtt
ttaagcctttaccttgaaggaaggagttatcaagagattgctgatatgattcacaaagat
gtaaagtcaattgacaatgctcttcaaagggttaaaaagaagattgaaaagtacttggct
ccagctgataaatga
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