Allochromatium tepidum: Atep_26500
Help
Entry
Atep_26500 CDS
T07447
Symbol
ntrC
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K07712
two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
atep
Allochromatium tepidum
Pathway
atep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Atep_26500 (ntrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
atep02022
]
Atep_26500 (ntrC)
Two-component system [BR:
atep02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
Atep_26500 (ntrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
AAA_16
Xre-like-HTH
HTH_23
HTH_Tnp_IS1
LSDAT_prok
AAA_7
MCM
Motif
Other DBs
NCBI-ProteinID:
BCU07973
LinkDB
All DBs
Position
2840722..2842161
Genome browser
AA seq
479 aa
AA seq
DB search
MTRAPNVWVIDDDRSIRWVLDRALRKAEMQVTCFSNGVGILESLRREQPDVILTDIRMPG
IDGLELLRQVTSRYPGLPVIIMTAHSDLDSAVSAFQDGAFEYLPKPFDLDEAVSQVSRAC
RRGREERAEEVSVVRGPDIIGEAPAMQDVFRAIGRLARSNITVLINGESGTGKELVAHAL
HRHSPRSERPFIALNMAAIPRDLLESELFGHERGSFTGAQARREGRFEQADGGTLFLDEI
GDMPAELQTRLLRVLADGEFYRVGGMAPIKVDVRIIAATHQNLEQLVREGRFREDLFHRL
NVIRIQLPALRDRREDIPLLMRHFLAQAARELSCESKILLPDAIDRLQQLDWPGNVRQLE
NTARWLTVMASGKHVHAEDLPPELNAGLSESVRDESWEQGLRRWARQRLKEGREGLLDTA
LPAFERILIQTALEQTGGRRQDAARLLGWGRNTLTRKLKELRLEPDFVVDEDGASEASQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactagagcaccgaatgtctgggtcatcgacgacgaccgctcgattcgctgggtgctc
gaccgcgccttgcgcaaggctgagatgcaggtgacgtgtttctccaatggggtcggcatc
ctggagtcgctccggcgcgagcagcccgatgtgatcctcaccgacatccggatgccgggg
atcgacggactggaactcctgcgtcaggtgacgagccgctatccgggtctgccggtgatc
atcatgaccgcgcactcggatctcgacagcgcggtctcggccttccaggacggggccttc
gagtatctgcccaaaccgttcgatctcgacgaggccgtctcccaggtcagccgggcctgc
cggcgcggacgcgaggaacgcgccgaggaggtcagcgtggtgcgcggacccgacatcatc
ggcgaggcgccggcgatgcaggacgtctttcgcgccatcgggcgtctggcgcgctccaac
atcacggtgctcatcaatggcgagtccggcaccggcaaggagctggtcgcccatgccctg
catcgtcacagcccgaggagcgagcgtccgttcatcgcgctcaacatggcggccatcccg
cgcgatctgctggaatcggaactcttcggccatgagcgcggttccttcaccggcgcccag
gcgcggcgcgagggccgcttcgagcaggccgacggcggcacgctgtttctcgacgagatc
ggcgacatgcccgccgagttgcagacccgactgctgcgggtgctggccgacggcgagttc
tatcgcgtcggcggcatggcgccgatcaaggtcgacgtgcgcatcatcgcggccacgcat
cagaatctcgaacagctggtgcgcgaggggcgctttcgcgaggatctgttccaccggctc
aacgtcatccgcatccagctgccggccctgcgcgaccggcgcgaggacatcccactgctg
atgcgccattttctggcccaggccgcgcgcgagctgagctgtgaatccaagatcctgctg
ccggatgcgatcgaccggctccagcagctcgactggccgggcaatgtgcgacaattggag
aacaccgcccgctggctgaccgtcatggcctccggtaagcacgtccacgccgaggatctg
ccgcccgaactcaatgccggcctgagcgagagcgtccgcgacgagtcctgggagcagggt
ctgcgccgctgggcgcggcaacggctcaaggagggccgcgaggggttgctcgacaccgcc
ttgcccgccttcgaacgcatcctgatccagaccgcgctcgaacagaccggcgggcgacgt
caggatgcggcacggctcttgggatgggggcgcaacaccctcacacgtaagctcaaggaa
ttgcgtctggagcccgatttcgtggtcgatgaggatggggcttccgaggcgtcccagtga
DBGET
integrated database retrieval system
