Agrobacterium tumefaciens Ach5: Ach5_21880
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Entry
Ach5_21880 CDS
T03816
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atf03000
]
Ach5_21880
Transcription factors [BR:
atf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Ach5_21880
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_50
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AKC07963
UniProt:
A0AA86KRP8
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Position
circular:2248410..2249336
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AA seq
308 aa
AA seq
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MKMSRQFPLNALRVFEAAARHLSFTKAGEELGMTQTAVSYQVKLLEENVGEPLFIRKARQ
VVLTEAGQRLAPKVAEAFNTLREAVDNVRDTSDTTLTIHSTATFASRWLSRHLGAFQLEH
PSIAVRLDTSSALIDFTQSDCDVAIRWSSDDGKGLIYHQLLRGVYTPMLHPNLAESIGGL
KKPEDLLRLRIIDPGDIWWSQWFREVGIENPGLDRYPRSRLSVQAFEAAAAIASQGVAML
TPELYADEIALGRLYQPFEHLSNEGKNYWLVYPENRRNIRKIRLFRDWILKRIDENRPQT
SQYPISGA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtctcgccagttccccctgaacgccctgcgcgtgttcgaagccgccgcccgg
catctcagcttcaccaaggccggtgaggaactgggcatgacgcagacggcggtcagctat
caggtgaaactgctggaagagaatgttggcgagccgctcttcatcagaaaggcgcggcag
gttgtgctgaccgaggccgggcagagactggcgccgaaagttgcggaagccttcaacact
ttacgggaggccgtcgacaatgtccgtgacacctctgacaccaccctgaccattcactcc
accgcgactttcgcatcgcgctggctttcgcggcatctgggagctttccagcttgaacat
ccctcgatcgccgtgcggctcgacacatcaagcgcattgatcgattttacgcagtccgat
tgcgatgtcgccatccgctggagcagcgacgatggcaaaggactgatctatcatcagttg
ctgcggggcgtttacacgccgatgctgcatccgaaccttgccgaaagcatcggcggattg
aaaaagccggaggatcttctgcgcctgcgcatcatcgatccgggtgacatctggtggagc
caatggttccgggaagtcggcatcgaaaatccgggcctcgaccgttatccgcgcagccgc
ctcagcgtgcaggctttcgaagccgcagcggcaattgccagccagggggtagccatgctc
acccctgaactttatgcggacgagattgccctcggccgcctttatcagcccttcgagcac
ctcagcaacgaaggtaagaactactggctcgtctaccctgaaaaccgcaggaacattcgc
aagataaggctgtttcgcgactggatactgaagcggatcgacgaaaaccggccgcaaaca
tctcaataccccatatcaggcgcataa
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