Agrobacterium tumefaciens Ach5: Ach5_29950
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Entry
Ach5_29950 CDS
T03816
Symbol
kdgD
Name
(GenBank) 5-dehydro-4-deoxyglucarate dehydratase
KO
K01707
5-dehydro-4-deoxyglucarate dehydratase [EC:
4.2.1.41
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00053
Ascorbate and aldarate metabolism
atf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
Ach5_29950 (kdgD)
Enzymes [BR:
atf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.41 5-dehydro-4-deoxyglucarate dehydratase
Ach5_29950 (kdgD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-ProteinID:
AKC08768
UniProt:
A0AA86FZK8
LinkDB
All DBs
Position
linear:complement(304128..305039)
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AA seq
303 aa
AA seq
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MNPEQIKAALGSGLLSFPVTHFDSEGRFAADSYRAHVEWLAGYKAPVLFAAGGTGEFFSL
KPDEIPAIVSAAKEVAGETAIVSGCGYGTEVAVDIARSVEKVGADGILLLPHYLIDAPQE
GLYAHIKKICQSVGIGVMVYNRDNSVLQADTLARLCDECPNLVGFKDGTGDIGLVRQITA
KMGDRLMYLGGMPTAELFAEAYLGAGFTTYSSAVFNFVPGLANEFYAALRAGERATCERI
LTEFFYPFMAIRNRAKGYAVSAIKAGVRLQGFDAGPVRAPLKDLTNEEIGMLDALIGTHK
RKV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgaacaaatcaaggcggcgcttggctccggcctgctctccttcccggtaacg
cattttgattccgagggtcgttttgcggccgatagctacagggcgcatgtcgaatggctt
gccggttacaaggcgccggtgctgtttgccgccggcggtacgggcgagttcttctcgctg
aagccggatgaaatccctgctatcgtttcggctgccaaggaagtggccggtgaaacggca
atcgtttccggctgcggctacggcaccgaggttgcggttgatattgcacgctcggtggaa
aaagtcggtgctgatggcatcctgcttctgccgcattacctcatcgatgcgccgcaggaa
ggcctttacgcgcacatcaagaaaatatgccagtcggtcggcatcggcgtcatggtttat
aaccgcgacaattcggtgcttcaggcggatacgctggcgcgtctctgcgatgagtgcccg
aacctcgtcggcttcaaggacggcaccggtgatatcggtctcgttcgccagatcaccgcc
aagatgggtgaccgcctgatgtatctcggcggcatgccgacggcggaactgtttgccgaa
gcctatctcggcgccggtttcacgacctattcctcggccgtcttcaacttcgtgccgggc
cttgccaacgagttctatgcggcgctgcgggccggcgagcgcgccacctgcgaacgcatc
ctgacggaattcttctatccgttcatggcgatccgcaatcgcgccaagggttacgctgtc
tccgccatcaaggctggcgttcgcctgcagggctttgatgcgggtccggtgcgcgcgccg
ctgaaggatctgacgaatgaggaaatcggcatgctcgatgccctgatcggcacgcacaag
cgcaaggtgtga
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