KEGG   Arabidopsis thaliana (thale cress): AT1G14640
Entry
AT1G14640         CDS       T00041                                 
Name
(RefSeq) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
  KO
K12825  splicing factor 3A subunit 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT1G14640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT1G14640
Spliceosome [BR:ath03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    AT1G14640
 Complex B
    AT1G14640
 Complex C
   U2 SnRNP specific factors
    AT1G14640
SSDB
Motif
Pfam: PRP21_like_P Surp APP_E2 ubiquitin
Other DBs
NCBI-GeneID: 838026
NCBI-ProteinID: NP_001319004
TAIR: AT1G14640
UniProt: F4HW92 A0A384LD26
LinkDB
Position
1:5023426..5025955
AA seq 735 aa
MFNSMKILPLEAPPADGNLGPLPPSQLTDEEIKENEFQGEQNNSIQTPIAVATHTNPIGI
IYPPPEIRKIVETTAQFVSQNGLAFGNKVKTEKANNANFSFLKSDNPYHGFYRYKVTEYS
CHIRDGAQGTDVDDTEDPKLDDESDAKPDLQAQFRAPRKILEAPEPEKYTVRLPEGIMEA
ELDIIKHTAQFVARNGQSFLRELMRREVNNSQFQFMKPTHSMFTFFTSLVDAYSEVLMPP
RDLKEKLRKSVADLTTVLERCLNRLEWDRFQEEEKNKEEDEKEKERVQMVMIDWKDFAVV
ESIDFADEEDKDLPMPMTLEEVIRRSKVSAMEEDEIVEPGKEVEMDMDEEEVKLVAEGMR
AANLEEYVGSVEIEEEAPMRIVKNWKRPEDRFLTERDSSKVVISRITGELIPITEMSEHM
RISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEEEVSNAVKAD
IEKKDEQPKQVIWDGHTGSIGRTANQALTQNSNGEQGDGVYGDPNSFPGPAAFPPPRPGV
PTVRPLPPPQNLALNLPRPPPSVQYPGAPRPLGVPMMQPMYQQHQLSMSGPHGHPSMMMS
RPPQMQPVMRVPPPPGSQFSHMQVPQPYGQLPPLSMGMMQPPPMAEMPPPPPPGEAPPPL
PEEPEPKRQKLDESALVPEDQFLAQHPGPATIRVSKPNENDGQVMEITVQSLSENVGSLK
EKIAGEMQIPANKQK
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgttcaattcgatgaagatactaccactggaggctcctcctgctgacgggaatttaggt
ccacttcctccgtcgcaattaacggatgaagaaatcaaagagaatgagtttcaaggagag
caaaacaattcaattcaaactcccatagctgtggctactcatacgaatccaatcggaatc
atttatccacctccagagatccgaaaaatcgtcgagacaacggctcaatttgtttcgcaa
aacggtttggcgtttggaaacaaagttaaaacagagaaagccaataatgctaatttcagc
tttttgaaaagtgataatccttatcatggcttttaccggtacaaggtcactgagtatagt
tgtcatattcgtgacggagctcaaggtactgatgtagatgatacagaagatcccaaactt
gatgatgagtctgatgcaaaacctgaccttcaggctcaatttagggctcctcgtaagatt
ttagaagcacctgaacctgagaagtatactgttagacttcctgaagggatcatggaggct
gagcttgatattattaagcacacggcgcagtttgtggcgcggaatggtcaatcgttttta
agggaattgatgcgtagagaggtgaataattctcagtttcagtttatgaagccaacacat
agtatgttcacttttttcacttctttggttgatgcgtattctgaagtattgatgcctccc
agagatttgaaagaaaagctgagaaagagtgttgctgatttgacgactgttctcgagcgt
tgtttgaatcggcttgagtgggatcgtttccaggaggaggagaagaacaaagaagaggat
gagaaagagaaggagagagtgcagatggttatgattgattggaaagattttgcagttgtt
gagtctatagattttgcagacgaggaggataaagatttgccaatgcctatgacacttgag
gaggttattaggaggagcaaagtttcagccatggaagaagatgaaattgttgagcctgga
aaggaagttgagatggatatggatgaagaagaagttaagcttgttgcagaaggaatgaga
gcagcgaacctggaagagtatgttggctctgtggagattgaagaagaagcaccaatgaga
attgttaagaactggaagaggcctgaagataggtttctgacagagagagattcgagtaaa
gttgttatatcacggattactggtgagctgattcccattaccgagatgtctgagcacatg
aggatttctcttattgatcctaagtttaaagaacagaaggatcggatgtttgctaagatt
cgtgagacaactctcgcacaagatgatgagattgctaaaaacattgtcgggttggcccgc
ctccgtcctgatatctttggaacaacagaagaagaagtttcaaatgctgtaaaagcagat
attgagaaaaaagatgagcaaccgaaacaagtaatatgggatggtcacactggaagtatt
ggtcgcacagcaaaccaagccttgactcagaactccaatggagagcaaggcgatggcgtt
tatggtgatcccaatagcttccctggtccagctgcttttcctcctcctcgaccaggtgtc
ccaactgtccggccactgccaccacctcaaaatctcgccttgaaccttcctcgtcctcct
ccttctgttcagtaccctggtgcaccaaggccattaggtgttccaatgatgcagcccatg
tatcaacaacaccagctctctatgtctgggccacatggacatccttcaatgatgatgagt
cgaccaccacaaatgcaacctgttatgcgtgtgccgcctccaccgggatctcagttttct
catatgcaagttcctcaaccttatggtcagcttccaccgctttcgatggggatgatgcaa
ccaccacctatggctgagatgcctcctcctccaccacccggggaggcaccaccgcctctt
cctgaggagccagagccaaaaagacagaagctcgatgagtcagcccttgttccagaagac
cagtttcttgctcagcatccgggtccggctacaatcagggtttctaagccaaacgagaat
gatggacaagtcatggagatcacagtgcagtcgttatccgaaaacgtgggaagtttgaag
gagaaaatagctggggaaatgcaaattccagcaaacaaacagaagtaa

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