Arabidopsis thaliana (thale cress): AT1G29900
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Entry
AT1G29900 CDS
T00041
Symbol
CARB
Name
(RefSeq) carbamoyl phosphate synthetase B
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00240
Pyrimidine metabolism
ath00250
Alanine, aspartate and glutamate metabolism
ath01100
Metabolic pathways
ath01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AT1G29900 (CARB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AT1G29900 (CARB)
Enzymes [BR:
ath01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AT1G29900 (CARB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_5
Epimerase
CoA_binding_2
Motif
Other DBs
NCBI-GeneID:
839868
NCBI-ProteinID:
NP_564338
TAIR:
AT1G29900
UniProt:
Q42601
A0A5S9WFA7
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All DBs
Position
1:10467956..10472211
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AA seq
1187 aa
AA seq
DB search
MRNHCLELSSNCSSIFASSKSNPRFSPSKLSYSTFFSRSAIYYRSKPKQASSSSSFSTFP
PCLNRKSSLTHVLKPVSELADTTTKPFSPEIVGKRTDLKKIMILGAGPIVIGQACEFDYS
GTQACKALREEGYEVILINSNPATIMTDPETANRTYIAPMTPELVEQVIEKERPDALLPT
MGGQTALNLAVALAESGALEKYGVELIGAKLGAIKKAEDRELFKDAMKNIGLKTPPSGIG
TTLDECFDIAEKIGEFPLIIRPAFTLGGTGGGIAYNKEEFESICKSGLAASATSQVLVEK
SLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDREYQRLRDYS
IAIIREIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAKLSV
GYTLDQIPNDITRKTPASFEPSIDYVVTKIPRFAFEKFPGSQPLLTTQMKSVGESMALGR
TFQESFQKALRSLECGFSGWGCAKIKELDWDWDQLKYSLRVPNPDRIHAIYAAMKKGMKI
DEIYELSMVDKWFLTQLKELVDVEQYLMSGTLSEITKEDLYEVKKRGFSDKQIAFATKTT
EEEVRTKRISLGVVPSYKRVDTCAAEFEAHTPYMYSSYDVECESAPNNKKKVLILGGGPN
RIGQGIEFDYCCCHTSFALQDAGYETIMLNSNPETVSTDYDTSDRLYFEPLTIEDVLNVI
DLEKPDGIIVQFGGQTPLKLALPIKHYLDKHMPMSLSGAGPVRIWGTSPDSIDAAEDRER
FNAILDELKIEQPKGGIAKSEADALAIAKEVGYPVVVRPSYVLGGRAMEIVYDDSRLITY
LENAVQVDPERPVLVDKYLSDAIEIDVDTLTDSYGNVVIGGIMEHIEQAGVHSGDSACML
PTQTIPASCLQTIRTWTTKLAKKLNVCGLMNCQYAITTSGDVFLLEANPRASRTVPFVSK
AIGHPLAKYAALVMSGKSLKDLNFEKEVIPKHVSVKEAVFPFEKFQGCDVILGPEMRSTG
EVMSISSEFSSAFAMAQIAAGQKLPLSGTVFLSLNDMTKPHLEKIAVSFLELGFKIVATS
GTAHFLELKGIPVERVLKLHEGRPHAADMVANGQIHLMLITSSGDALDQKDGRQLRQMAL
AYKVPVITTVAGALATAEGIKSLKSSAIKMTALQDFFEVKNVSSLLV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaccattgcttagaactctcttccaattgttcctccattttcgcttcttccaaa
tccaatcctcgtttctctccttccaagctctcctattccactttcttctctcgctctgcc
atctattacagatcaaaaccaaaacaagcctcgtcttcttcttccttctccactttcccc
ccatgtctcaatcggaaaagctccctcacgcatgttctcaaacccgtctcagagctcgcc
gacaccactaccaagcctttttctccggagatcgtcggcaagagaaccgatctgaagaag
attatgattctcggcgctggtccgattgtcattggacaagcttgtgagtttgattactct
ggtactcaagcttgtaaagccttaagagaagagggctatgaggttatcctgatcaattcg
aatcctgccactatcatgactgatccggaaactgctaatcggacttatatcgctccgatg
actcctgagcttgtcgagcaggttattgagaaagagaggcctgacgctttgttaccaacc
atgggtggtcaaaccgcattgaacctcgcggttgctcttgctgagagtggtgctttggag
aaatacggtgttgaattgataggagctaagcttggtgcgattaagaaagctgaagatcgt
gagttgttcaaggatgcgatgaagaacattgggctaaagactccaccttcagggattggg
accactcttgatgagtgttttgacattgctgagaaaattggtgagttccctttgattatc
cgtcctgcgtttactttaggtggtactggtggtggaattgcgtataacaaagaggagttt
gagtctatatgtaaatcgggtttggctgcgagtgcgacaagtcaagttcttgtggagaaa
tccttgttgggttggaaagaatatgagcttgaggtgatgagagacttagctgacaatgtt
gtcattatctgttccattgagaatattgatcctatgggtgtgcacactggtgattccatc
actgtggcacctgcacagactctaacggatagagagtaccagcggcttagggattattcc
attgcgattatacgggagattggtgttgagtgtggtggatctaatgtgcagtttgctgtc
aacccggttgatggtgaagttatgatcatagagatgaaccctagggtctcaagatcttct
gctcttgcttccaaggctacagggtttcccattgctaaaatggctgccaagttgtctgtt
ggctataccttggatcagattcctaatgatatcacgaggaaaacaccggctagcttcgag
ccctccatcgattatgtggtgactaagattcctcgatttgcatttgaaaagtttccagga
tctcagccattgctaacgacccagatgaaatctgttggggaatctatggctctcggccgt
acattccaagaatctttccagaaagctctgaggtctctggagtgtggattctcgggttgg
ggttgtgcaaaaattaaagagctagattgggactgggatcagctgaaatacagcctaaga
gtcccaaatcctgacaggatccatgcgatatatgctgccatgaaaaagggtatgaaaatt
gatgaaatctacgagttgagcatggtggacaagtggttcctaacccagcttaaagagctc
gtggacgtcgaacagtatcttatgtccggaaccttgtcagagattacaaaagaagacctt
tacgaagtcaaaaagcggggatttagtgacaagcaaatcgcttttgctacaaagacaacc
gaggaagaagtccgtaccaagcggatttctctaggagttgttccatcttacaagagagtg
gatacatgtgctgcagagttcgaagcgcatacaccatacatgtactcttcatatgatgtt
gaatgtgaatcagctccaaacaacaagaagaaggttttgattttgggtggagggccaaac
cgcattggtcaagggattgaatttgattactgttgttgccacacatctttcgccttacag
gatgctggatatgagaccataatgttgaactcaaatcctgaaacagtatccacagattat
gatacaagcgataggctctattttgaacctctcacaatcgaggatgttctcaatgttatc
gaccttgagaaacctgatggcataatagtgcaatttggtggtcaaactcctctgaaactt
gctctgccgatcaaacattatttggataagcacatgcccatgagcttgagcggagcggga
cctgttcgcatctggggtacatcacctgactccattgacgctgctgaagacagagagagg
ttcaatgcaattctcgacgagctgaagattgagcagcccaagggaggcattgcaaagagc
gaagctgatgcattagccatagcaaaggaggtagggtacccagttgtggtaagaccttct
tatgttctaggtggacgagcaatggagatcgtttatgatgacagtagactaataacctat
ttggaaaatgcggtacaagttgacccagagagacctgttttggtagataaatatctttct
gatgccattgagatcgacgttgatacccttactgattcctatggaaatgtggtgattggt
ggaataatggagcatatcgaacaagctggtgtgcattctggtgactcagcttgtatgctt
ccaacacaaaccatcccagcttcttgtttgcaaactattcgaacatggaccactaagctg
gcgaagaagctaaatgtatgtgggctgatgaactgtcagtacgcaatcacaacatctggg
gatgtttttttgctggaagccaatccccgagcttcccgtactgtcccttttgtgtcaaaa
gccattggacaccctcttgccaagtatgcagcgctggtcatgtcgggcaaatctctcaaa
gatcttaactttgaaaaagaagttatccctaaacatgtctctgtgaaagaagctgttttc
ccgtttgagaagttccaaggatgcgatgtgatactcgggccagagatgagaagcacagga
gaagtgatgagcatcagttctgaattctcaagtgcgtttgcaatggctcagatcgctgca
ggtcaaaagctacctctatcaggcacagtcttcctcagcttaaacgatatgaccaaaccg
cacctggagaaaatcgcggtgtccttcctcgagcttgggttcaaaatagttgccacctcg
ggaacagctcatttcctggaactgaaaggcattccagtggagagagtgttgaagttgcat
gaaggaagaccacatgctgctgatatggtggcgaatggtcagatccatttgatgttgatc
acaagctcgggtgatgctcttgatcagaaagatgggagacagctcagacaaatggctcta
gcatacaaggtacctgttataaccactgttgctggtgcattggccactgctgagggaatc
aagagcttgaagtcaagtgccattaaaatgaccgctcttcaggacttctttgaggtaaag
aatgtatcttctttgctcgtctga
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integrated database retrieval system
