Arabidopsis thaliana (thale cress): AT1G52360
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Entry
AT1G52360 CDS
T00041
Name
(RefSeq) Coatomer, beta' subunit
KO
K17302
coatomer subunit beta'
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G52360
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT1G52360
Membrane trafficking [BR:
ath04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
AT1G52360
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
AT1G52360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
WD40_like
HD
Clathrin
Motif
Other DBs
NCBI-GeneID:
841666
NCBI-ProteinID:
NP_001322821
TAIR:
AT1G52360
UniProt:
Q9C827
LinkDB
All DBs
Position
1:19499146..19506309
Genome browser
AA seq
926 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPV
RSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGERLPLSVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFSKNFQ
EKRSIRPTFSAEKIFGGTLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWADSGDLVAI
ASDTSFYILKFNRDLVTSHFDSGRPTEEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS
SWKLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKASEILPTIPKDQHNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQE
IAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
VNSKAAESLADPEEYSNLFEDWQVALSVEAKAVETRGVYTGAKDYPSHADKSSMTLVEAF
RNLQVEEEESLENGDMDHEEVVAEENGNEQRNEDDVAEHVEEHHEEKEAEEEEGIVDGDS
TDGAVLVNGSEADEEWGTNNEGNPSA
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagactcgagatcaagagaaaattagcgcaaaggtctgagagagttaaatct
gtggatcttcatcctacagaaccatggattcttgcaagtttgtattctggaaccttgtgt
atttggaactaccagacgcaggtgatggcaaaatcctttgaggtgactgaattaccagtt
cggtcagccaagtttgtagcacgaaagcaatgggttgtcgcaggagctgatgatatgtat
atccgtgtatacaattacaacaccatggacaaggttaaagtgtttgaggctcattcagac
tacattaggtgtgtggctgttcatccaacccttccatatgtgctgtcatcttctgatgat
atgctcataaagctttgggactgggaaaagggttgggcttgcactcagatattcgaggga
cactcacactatgtgatgcaagtcacatttaatccaaaagacaccaacacttttgccagt
gcatcccttgatcgtaccataaagatttggaatcttggttccccagacccaaattttaca
ttggatgcccatcagaaaggagtaaattgtgtagattatttcaccggtggtgataagccc
tatttaattaccggctctgatgatcacactgctaaggtctgggactaccaaacaaaaagt
tgtgtacagaccctggaggggcacacacacaatgtatctgcagtatgtttccatccagag
cttccaattataatcacaggttctgaagatggcaccgttcgcatttggcatgcaaccaca
tacaggctagagaacacattgaattatggccttgagagagtctgggcaattggttacatt
aaaagttcacgccgggttgtgatcggatatgatgaaggaaccatcatggttaaacttgga
cgagaaattcctgtcgctagcatggacaataccggaaaaatcatatgggctaagcataat
gaaattcaaactgcaaacatcaaaagtattggtgcagattacgaggttactgatggagaa
aggttgcccttgagtgttaaagagttggggacctgtgatctttatccacaaagcttgaag
cacaaccctaatgggaggtttgtcgtagtctgtggtgacggagaatatataatctacacg
gctttggcttggagaaataggtcatttggttctggactggaatttgtttggtcatccgag
ggggagtgtgcggttagagaaagctcatcaaagattaaaatatttagcaaaaatttccag
gaaaagaggagtatccgccctactttttcagctgagaagatctttggaggaaccttgtta
gctatgtgttcaagtgatttcatctgcttttatgattgggctgaatgtaggctgattcaa
cgtattgacgtcactgtaaagaatctatattgggctgacagtggtgatttagtagccatt
gctagtgacacatcattctacatcttgaaattcaaccgcgacttagttacctcacatttt
gatagcggaagacctactgaggaagaaggtgttgaggatgcttttgaggttctccatgaa
aatgatgaacgtgttaggacaggtatatgggttggtgactgtttcatttacaacaactct
tcctggaagcttaactactgtgttggaggcgaggtaaccacaatgtatcatttggaccgc
ccaatgtatttgttgggatatcttgcaagtcaaagtcgggttttcttggtagacaaagaa
ttcaatgttatagggtacaccttgttgctaagcctgattgagtacaagactcttgtgatg
cggggtgatttagacaaagccagtgaaatcttacctacaattcctaaagatcagcataac
agtgttgctcatttcttggagtcacggggaatgattgaagatgctctggaaattgcaaca
gatcctgactacagatttgagttggccatacaactgggtagacttgaaattgcacaggaa
atcgctgtggaagtacagagcgaatctaagtggaaacaattaggagagttagctatgtcc
tccggaaagctgcaaatggctgaggaatgcatgaagtatgcgatggatttgagtggtttg
ttacttctttattcttctctgggagatgctgaaggtgtaacaaaacttgcaacacttgct
aaagaacaagggaagaacaatgtcgcctttctttgcctattcatgctgggtaaactggaa
gattgtttgcagttattggtggagagtaaccggataccagaagctgctctgatggcacga
tcatatcttccgagcaaagtttctgagatagtagctctttggaggaaagatctcagcaag
gttaattcaaaagcagcagaatctttggctgatcctgaggagtactcaaatctttttgaa
gattggcaagttgctctttctgtggaagctaaagctgtagagacaaggggagtttacaca
ggtgcaaaagattatcctagccatgctgataaatcttccatgaccctcgtggaagccttc
cgaaacttgcaagttgaggaagaggaatcacttgaaaatggagatatggatcacgaggag
gtagtagcagaagaaaatggaaatgaacaaaggaatgaggatgatgtagcggagcatgta
gaggagcatcatgaagagaaagaagcagaagaagaagagggaattgttgatggagactct
acggatggagctgtacttgttaatggaagtgaggctgacgaagagtggggtacgaataat
gaaggaaacccatcagcctaa
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