Arabidopsis thaliana (thale cress): AT1G70070
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Entry
AT1G70070 CDS
T00041
Symbol
EMB25
Name
(RefSeq) DEAD/DEAH box helicase
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G70070 (EMB25)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AT1G70070 (EMB25)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AT1G70070 (EMB25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
IstB_IS21
AAA_22
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
843343
NCBI-ProteinID:
NP_177164
TAIR:
AT1G70070
UniProt:
B9DFG3
LinkDB
All DBs
Position
1:complement(26390016..26394196)
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AA seq
1171 aa
AA seq
DB search
MNTLPVVSLTASSSFKFFHFPSLHRSLSHSPNFSFTKSLILNPNHLSFKSTLNSLSPSQS
QLYEEEDDEEEEEEDEDDDDEAADEYDNISDEIRNSDDDDDDEETEFSVDLPTESARERV
EFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEAFLRGSSVVVSAPTSS
GKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDNVGLLTGDSAINKDAQ
IVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISRGTVWEEIVIYCPKEV
QLICLSATVANPDELAGWIGEIHGKTELVTSTRRPVPLTWYFSTKHSLLPLLDEKGINVN
RKLSLNYLQLSASEARFRDDDDGYRKRRSKKRGGDTSYNNLVNVTDYPLSKNEINKIRRS
QVPQISDTLWHLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLDDCEKSEVELALKKFRV
LYPDAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPAR
TAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLVQTAFEGAEECCKLVFA
GVKPLVSQFTASYGMVLNLVAGSKVTRKSSGTEAGKVLQAGRSLEEAKKLVEKSFGNYVS
SNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYKEITVLKEELREEKRKR
AEQRRRMELERFLALKPLLKGMEEGNLPFICLEFKDSEGREQSVPAVYLGHIDSFQGSKL
QKMMSLDESFALNLIEDELAADEPGKPNVKPSYYVALGSDNSWYLFTEKWVRTVYRTGFP
NIALALGDALPREIMKNLLDKADMQWDKLAESELGSLWRLEGSLETWSWSLNVPVLSSLS
DEDEVLHMSEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYKKILENANLTVEKMKRLK
ARSRRLINRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFPLGETAAAIRGENELWLA
MVLRNKALVDLKPPQLAGVCASLVSEGIKVRPWRDNNYIYEPSDTVVDMVNFLEDQRSSL
IKLQEKHEVMIPCCLDVQFSGMVEAWASGLSWKEMMMECAMDEGDLARLLRRTIDLLAQI
PKLPDIDPVLQRSAAAAADIMDRPPISELAG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcttcccgtcgtctctctcacagcttcttcttccttcaaattcttccatttt
ccttctctgcaccgttctctctctcattccccaaacttctccttcaccaaatcccttatc
ctcaatccaaaccacctctccttcaaatccaccttaaattctctttcaccgtctcagtct
cagctctacgaggaagaagacgacgaagaagaagaagaagaagacgaagatgatgatgac
gaagctgctgacgaatacgacaatatctccgatgaaattcggaatagcgatgacgacgac
gacgatgaagaaaccgaattctccgtggatttgccgacggaatcagctcgggaacgagtg
gagttccggtggcagagagtggagaagcttcgtagtcttgttagagattttggtgttgag
atgattgatatcgatgaactcatttcaatctacgattttcgaatcgacaagtttcagaga
ttggctattgaagcttttcttagaggttcttctgttgtggtttctgctccgactagtagt
ggcaagactttgattgctgaagctgctgctgtttccacggtggctaaaggtcgccggttg
ttctacactacacctcttaaagcactctctaatcagaagtttcgtgagtttagggagaca
tttggggatgataatgttggtctactcacaggtgactctgctattaacaaagatgctcag
attgtgattatgactacagagattctccgtaacatgttgtatcaaagtgttggaatggct
tcttcaggaactggactttttcatgttgatgccattgttttggatgaggttcactattta
agtgatatatctaggggaactgtgtgggaagagatagtcatttattgtccaaaggaggtt
caacttatatgcctatcagctacagttgcaaatccggatgaattagctggttggattggt
gagatacatggtaaaactgagttggtaacatcgacaagacgcccagttccattaacttgg
tacttttcaacaaaacattctttattacctctgcttgatgagaaagggataaacgtgaat
aggaagctttctctcaattatttgcaactgtctgcctcagaagctagattccgtgatgat
gatgacgggtataggaaaaggaggtcaaagaaacgaggaggtgataccagctacaacaac
cttgtgaacgtaactgattatcctctttcaaagaatgagataaacaagattcgtcgatca
caggtacctcaaattagcgacacattatggcatctccaggggaaaaatatgttaccagcg
atatggttcatttttaaccgtagaggatgtgatgcagctgtacagtatgttgaaaatttt
cagcttttagatgattgcgagaagagtgaggttgagttggccttgaagaagtttcgcgtt
ctttatccagatgcagtgagagagagtgcagagaaaggactgcttaggggaattgctgct
catcatgcaggttgtctacctctttggaaatctttcattgaggaactttttcagcgagga
cttgttaaggttgtctttgctactgagacacttgctgctggaataaacatgccggctaga
acggctgttatctcgtctctttcaaaaaaggctggtaatgaacgaatagagttgggtcct
aacgaattgtaccagatggctgggcgtgctggacgcagaggcatcgatgaaaagggctac
actgtgctggttcagactgcttttgaaggcgctgaagagtgctgcaaacttgtctttgct
ggagttaaacctctcgtgtcacaatttactgcttcatatggcatggtactgaatctggta
gctggttcaaaagttactcgtaaatcaagtggaactgaggccgggaaagtcttacaagca
gggagaagtctggaagaagccaagaaattagttgagaagagttttggaaactatgtgagc
agcaatgtgacggttgctgcgaagcaggaacttgctgaaatcgacaataagatcgagatt
ctgtcatctgaaataagtgatgaagcaatagataagaagagtaggaaacttctttcagcg
agggattacaaggagatcactgtacttaaagaagagctacgggaagagaaacgcaagcgt
gctgaacaacgaagaagaatggaactcgaaaggttcttagctctaaaaccgctcttaaaa
gggatggaagaggggaacttaccatttatttgtttggagttcaaggattctgaagggagg
gagcagtcagtccctgctgtttacttggggcatattgattcatttcagggttccaaactt
cagaagatgatgtctttggatgagtcttttgcgttaaacttaatcgaggatgagctggcg
gctgatgaacctggaaagcctaatgttaaaccgtcttactatgtggcccttggctctgat
aactcatggtatctctttactgagaagtgggttaggactgtctacagaactggtttccct
aacattgctctagcgcttggagatgctttgcctcgagaaatcatgaagaatctcctggat
aaagcagatatgcagtgggataaactagctgaatctgaacttggaagtttgtggagattg
gaaggatctctagagacatggtcctggagtttaaacgtacctgtcctaagcagcctttct
gacgaagatgaggtgttacatatgtccgaagagtatgataacgcggcgcaaaaatacaag
gaacaaaggagcaaaatttcgcgtttgaagaagaagatgtcccggtcagaagggttcaga
gaatataagaaaattctagagaatgctaacttgacggttgagaagatgaaacggctcaag
gcgagatcgagacgccttataaaccgtttagagcagattgaaccgtctggttggaaagat
ttcatgcgcataagcaacgtgattcacgaaagcagagcattggacattaatacacacttg
atatttcctctgggagaaacagctgctgcaatccgaggagaaaacgagctttggcttgca
atggtgttgcggaacaaagccctggtggatctcaagcctcctcaactagctggtgtatgt
gcaagtttagtttcagaaggcataaaagttcgaccttggagagacaacaactatatttac
gagccatctgatacagtagtagacatggtcaatttcttagaagaccaaagaagctctctt
ataaagcttcaagagaagcacgaggttatgattccatgttgtctggacgttcagttctct
ggtatggttgaagcttgggcttctggattaagttggaaagaaatgatgatggaatgtgca
atggacgaaggcgatcttgctcgcctgttacgacgcacaattgatctcttagctcagatt
cctaagttgcctgatattgacccagtcctgcaacgtagtgcagcagctgcagcagatatc
atggaccgtccaccaattagtgagcttgccggttaa
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integrated database retrieval system
