Arabidopsis thaliana (thale cress): AT1G79990
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Entry
AT1G79990 CDS
T00041
Name
(RefSeq) coatomer subunit beta-2
KO
K17302
coatomer subunit beta'
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G79990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT1G79990
Membrane trafficking [BR:
ath04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
AT1G79990
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
AT1G79990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
WD40_like
TPR_2
TPR_12
TPR_8
Motif
Other DBs
NCBI-GeneID:
844339
NCBI-ProteinID:
NP_001154478
TAIR:
AT1G79990
UniProt:
Q9CAA0
A0A178WGE9
LinkDB
All DBs
Position
1:30085750..30092239
Genome browser
AA seq
920 aa
AA seq
DB search
MPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLG
REIPVASMDNSGKIIWAKHNEIHTVNIKSVGADEVTDGERLPLAVKELGTCDLYPQSLKH
NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEHAVRESSTKIKIFSKNFQE
KKTVRPTFSAEHIFGGTLLTMCSSDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIA
SDTSFYILKFNRDIVSSYFDGGKQIDEEGIEDAFELLNETNERVRTGLWVGDCFIYTNSS
WRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMR
GDLEQANEVLPSIPKEHHNSVAHFLESRGMTEDALEVATDPDYRFELAIQLGRLAVAKDI
AVEAQNESKWKQLGELAMSSGKLDMAEECMRHAMDLSGLLLLYSSLGDADGMMKLAALAK
EQGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALMARSYLPSKVSEIVALWRNDLTKI
SPKAAESLADPEEYPNLFEEWQVALSLENRAAETRGVHPPAGDYCSHADRDHTTLVDAFR
IMQIEEEGRLEQGDVLDEVGEEGEDGEEEEEEDRQEESSDGRQQNVEEEAVVVDADSTDG
AVLVNGNESEEQWVLTPPQE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgccactgagactcgaaatcaagcgtaagtttgctcaaagatcagaaagagtcaaatct
gtagatctccatccaacagagccatggatcctggcaagtttgtattccggaactctgtgc
atctggaattaccagacccagacaatggtaaaatctttcgacgtgactgaattgcctgtt
cggtcagcaaagttcattgcacggaagcagtgggttgtagctggagctgatgacatgttt
attcgtgtctacaactacaacactatggataagatcaaagtatttgaggctcatgctgat
tacattcgctgtgttgctgttcatcccacgcttccctatgtcttatcatcatctgatgat
atgctcatcaagctctgggactgggaaaagggttggctttgcactcaaattttcgaaggc
cattcccattatgttatgcaagtcactttcaaccccaaagacaccaatacttttgctagt
gcatcccttgaccgtaccataaaaatatggaatcttggctctccggatccaaattttact
ttggatgcacatctcaaaggggtaaactgtgtagactactttactggtggggataaacca
tacctaatcactggttctgatgatcatactgctaaggtgtgggattaccaaacaaagagt
tgcgttcagactctcgaaggtcatacacacaatgtttctgcagtatcttttcatccagag
ctacctataattattacaggatccgaggatggaactgttcgcatatggcacgccaccact
tacaggcttgagaatacattgaactatggccttgagagggtttgggctattggacacatt
aaaggttcacgccgggttgtaattggttatgacgaaggatccataatggtgaaacttggc
cgtgaaataccagtggctagtatggataacagcggaaaaattatttgggctaaacacaat
gagatacatactgtaaacatcaagagtgtgggcgcagatgaggtcactgatggtgagaga
cttcctttggccgttaaagagctagggacctgcgatctttatcctcaaagcttgaagcac
aaccctaatggtaggtttgtggtagtttgtggagatggtgagtatattatctacactgcc
ttggcgtggcgaaataggtcatttggctctgcgctagaatttgtttggtcatctgatggg
gagcatgctgtcagggaaagctcgacaaagatcaagatcttcagcaagaatttccaggaa
aagaagactgtgagacccaccttctcagcagagcacatttttggtgggacgttattgaca
atgtgctcaagtgattttatatgcttctatgattgggcggaatgtaggttgattaggcga
atagatgttactgtcaaaaatctttattgggcggacagtggtgatctagttgcaattgcc
agtgatacatcattctacatccttaagttcaatcgtgacattgtttcctcttattttgat
ggcggtaaacaaattgatgaggaaggcattgaggacgcatttgagcttctcaatgaaacc
aatgaacgtgttcggactggcttatgggttggggattgttttatctataccaactcttct
tggaggcttaattactgtgttggtggtgaggtaactacaatgtatcatctggaccgtcct
atgtacttgttgggttatctcgctaatcaaagcagggtttatttgattgacaaagagttc
aatgttattggatacactttacttttaagtttgattgagtacaagactcttgtgatgcgt
ggagatttggaacaggctaatgaagtcttaccttcaattcctaaggagcaccataatagc
gtggcacactttttggagtcacgtggcatgacagaagatgctctagaagtagcaactgat
cctgactacagatttgagttggccatacagctcggtagattggctgtcgcaaaggacatt
gctgtagaggcacaaaatgaatctaaatggaagcaacttggagaattagctatgtcaagt
gggaagctggatatggctgaggaatgcatgaggcatgctatggatttgagtggtctgctg
ctgctttattcttcattgggagatgcagatggaatgatgaagctggcagcacttgcaaaa
gagcaaggaaagaacaatgtcgcttttctttgcttgttcatgttgggtcaagtagaagac
tgcctgcatctgttggtggaaagtaatcgaatacctgaagccgctctgatggcgagatcg
taccttccaagcaaggtctccgaaatagtggcattgtggagaaacgatttgaccaagata
agtccaaaggctgctgaatctctggctgatcccgaagagtatcccaatctctttgaggag
tggcaagtcgccctgtcccttgaaaatagagctgcagagacgaggggcgtccatcctcct
gctggggattattgtagtcatgcagacagagatcatacaactttagtggatgcttttaga
attatgcaaatagaggaagagggtcgacttgagcaaggggatgttctcgacgaggttggg
gaagagggggaagatggagaggaagaggaggaggaggatcgtcaggaagagagtagtgat
gggagacagcagaatgtggaagaagaggctgttgtggtggacgctgactctacggatggt
gctgtgctagttaatggtaacgagtctgaagaacagtgggttctaacaccgccacaagag
tag
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