Arabidopsis thaliana (thale cress): AT2G45500
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Entry
AT2G45500 CDS
T00041
Name
(RefSeq) AAA-type ATPase family protein
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT2G45500
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ath04812
]
AT2G45500
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
AT2G45500
Membrane trafficking [BR:
ath04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
AT2G45500
Cytoskeleton proteins [BR:
ath04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
AT2G45500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_5
AAA_22
AAA_16
AAA_14
TIP49
Mg_chelatase
AAA_2
TniB
RNA_helicase
nSTAND3
DUF815
IstB_IS21
AAA_25
Guanylate_kin
AAA_33
DUF4368
AAA_24
NACHT
AAA_7
Motif
Other DBs
NCBI-GeneID:
819158
NCBI-ProteinID:
NP_001078063
TAIR:
AT2G45500
UniProt:
Q0WMJ4
LinkDB
All DBs
Position
2:complement(18749352..18752866)
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AA seq
487 aa
AA seq
DB search
MSFLRGIIDSFSSILNEESKKDPSVSSSSTSSESMNGIDGVPVTNERIAYKLKGYFDLAK
EEIAKGVRAEEWGLHDDALLHYRNAQRIMNEATSTPSPSYISSSEKEKVRSYREKISNWQ
NQVSERLQALGVGMSENKRTVAYPSSASVSSTASRYRKTLSQKTPVARGGVATPRNPKDA
AASPKPVKESGNVYDDKLVEMINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRD
LFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTL
FQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRLKSEFLIQFDGVTSNPDDLVIIIGAT
NKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKETEGYSG
SDLQALCEEAAMMPIRELGANILTIQANKVRSLRYDDFRKSMAVIRPSLSKSKWEELERW
NSEFGSN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctcagaggtataattgattcgtttagctctattctcaacgaagaatctaag
aaagatcctagtgtttcatcatcatcaacttcttctgagtccatgaatggtatcgatgga
gttccggttactaacgaacgaattgcgtataagcttaaaggatacttcgatttagcgaaa
gaggaaatcgctaaaggggttagagcagaagagtggggtttacatgatgatgctcttctt
cattatagaaatgctcaaaggatcatgaatgaagctacttctactccttctccttcgtat
attagttccagtgaaaaggagaaggtgagatcgtaccgagagaagatttcaaattggcaa
aatcaagtatctgagagattgcaagctttgggtgttggaatgtctgagaataagaggacg
gtggcatatccttcttcagcttcagtttcctctacagcgtcaaggtataggaaaacttta
tcgcaaaagactccggttgccagaggtggcgttgcaacgccaaggaaccctaaagatgct
gctgcaagcccaaaacctgtgaaagaatctggaaatgtctatgatgataagttggttgag
atgataaatacaacaatagtggatagaagcccatctgtgaaatgggatgatgtcgctgga
cttaatggagctaaacaagctttgttggagatggtaattttaccggcaaaacgaagagat
ttgttcactggtctccgaagaccagcgagaggtctgcttctctttgggccacctggcaat
gggaaaacaatgcttgccaaggcagtcgcttctgagtcacaggcaacatttttcaatgtc
tcagcatcttctttgacatcaaaatgggtgggtgaggctgaaaagctagttaaaacgctg
tttcaagttgcaatatccagacaaccgtctgttatatttatggatgaaatagatagtata
atgtcaacaaggtcaaccagtgagaatgaagcaagcagaaggctgaaatcagaatttctt
atccagtttgatggtgtgacttctaatcctgatgatttggtgattatcattggagctact
aacaagccacaggagttggatgatgcagtgcttaggagattggtgaagagaatatatgta
ccattgccggattccaacgtcagaaaactactttttaaaactaaattaaagtgccagcct
cactcgttatccgatggcgacattgataaaatcgtcaaagaaaccgaaggatactcagga
agcgatctccaagcattgtgtgaagaagctgcaatgatgccaatcagagaactcggtgca
aatattctaacgatccaagcaaataaagtaagatctctacgatatgatgattttcggaaa
tcaatggcagtgatcagaccaagcttgagtaaaagcaaatgggaagagcttgaacgttgg
aactcagagtttggctctaattga
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