Arabidopsis thaliana (thale cress): AT3G06290
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Entry
AT3G06290 CDS
T00041
Symbol
SAC3B
Name
(RefSeq) SAC3/GANP/Nin1/mts3/eIF-3 p25 family
KO
K23719
nuclear mRNA export protein SAC3
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT3G06290 (SAC3B)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
AT3G06290 (SAC3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
MCM3AP_GANP
SART-1
Motif
Other DBs
NCBI-GeneID:
819803
NCBI-ProteinID:
NP_187280
TAIR:
AT3G06290
UniProt:
F4JAU2
LinkDB
All DBs
Position
3:complement(1898877..1907448)
Genome browser
AA seq
1697 aa
AA seq
DB search
MAFRPFGKDLGPMSSKPAPFTPFGASSTTRLYLSFLFLHTANVGFACSDSSIQPPASQNH
SAFAGQSFGPGGIRSGPSIQRAPPLSASQNPQLSIGKPYRPGGVQSVPPINRIPSPSAFQ
NPSPSSGQPYQPGGIQRIPEPFNGIAWGPEASRTSPSVRPYQFPGVQRPNLNPQYGHDGS
RNFLKDHGEHSRATSPPATSHILSRMGTDAVEIGRSQDSKRKSRSDILPDQNMGFSRRNQ
SPVSGFENGNLVDGFQPLSSRTWMRSPSSAENNPVRSRSNPNQLIHQEQTGNSSFPYAHE
VAEIQEATRRKSSAVAPSDKPLGDDPILSQHDSQRFSTSPPTSGTKSYTLSRSSDSQFPG
QPSSVNSFNNARKTNSSPATKRTRSPPVYPIEEDIPRNSFPSQDCTEGEEQARAKRLARF
KGELEPIADRPVDIQLTKSPVNKTMKPLDNKQTFNSLESSRDALKGDALPDYENSEQPSL
IIGVCPDMCPESERGERERKGDLDHYERVDGDRNQTSKSLAVKKYTRTAEREAILIRPMP
ILQNTMEYLLSLLDRPYNENFLGMYNFLWDRMRAIRMDLRMQHIFNQEAITLLEQMIRLH
IIAMHELCEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKKGITVPTEKEFRGYY
ALLKLDKHPGYKVEPSELSLDLANMTPEIRQTSEVLFARNVARACRTGNFIAFFRLARKA
SYLQACLMHAHFSKLRTQALASLHSGLQINQGLPVSDMSNWIGMEEEDIEALLEYHGFSI
KVFEEPYMVKNDLFLHADKDYKTKCSKLVHMKKSRTIVEDVSAPTVVEDVSTPFPLPSLI
TEATIGNQQCITAHKHEMPPARSLKKQTSMRLFDKEVADSKTSLLAEEDKPMGTFVMNPP
GPFVINPVVHQEKQNDLTSAGGFHSPVKLYSPFGSPKFPQTKSSNLEKQPNDDRIGMSPG
EIKFSIIGDVYTNHVPGPALQQSPKSMPMEIMPVTTIAECPTSVENKYALEESVPEAAMI
CTLEKEFNDIDEEDEDEDGVILNQYDEEVAKAKLKLIIRLWKRWSSRQSELRERRQLAAA
AALNSLSLGTPIRFSKTDQSRACGEFNIDQAMRRRFEEREKSWSRLNISDVIADILVGRN
PESKCISWKVVLCTQTKSVNSSSSASQVTHSAASRWLSSKLMPHAEHSSLNDDNLLFSAP
GVSVWNKWVANGSDIDFTCCLSVARDVEAENDMCETTCGASAVLFLASGGLPLNLQREQL
NLILESVPNGSVLPLLVVISSCNGEHMEPDTDIVSGLGLHDIDKSKIASFSIVSIANKSQ
KGQEVHFFNDSRLRDGFKWLASNSPLQPNLHHVKLRELFLTHFSFSLELLKQMPDQEVGP
NICISAFNDALETSRRNITSAAEANPIGWPCPETMLLEDNRKECLMVKRYLPNLDWSSAE
NVELLSSVLENCKLPDFEDDLTWLTVGCASGAEIENHTQRLEGCLIEYLTQRSNLMGVSL
ATKETGVMLERNTRLELHNSSRYHITPRWIGIFQRIFNWRIMGLFDASSSSAYVLKSDLN
MSTSSYADKFLAEDASYPSCPPNLPLLHEMIEISCSPLKSPPPYDDKAQRVVETGMLIDD
HRDIEESMLEKNREACRGIDLMITEDDELGERSWRSKGREAAEKKTIEKRESERLDELLE
KCNMVQNSIAEKLCIYF
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaggcctttcgggaaggacttaggtccgatgagctctaagccagcgccgttt
acaccgttcggtgcttcttcaaccactagattgtacctttcttttttattcttacacact
gcgaatgttggatttgcttgtagtgattcatcaattcaaccaccggcgtctcaaaaccat
tcagcctttgcaggacaatcttttggacctggtggaattcgaagtggtccttcaattcag
cgagcaccacctctgtcggcttctcaaaaccctcagctctctatagggaaaccttaccga
ccaggtggggttcaaagtgttcctccaattaatagaataccatctccgtcggcttttcaa
aatccatcaccctcctcaggacaaccttaccaacctggtggaattcaaaggatcccagaa
cctttcaatggaatagcatggggtccagaagcttcacgtacaagcccctctgtgagacct
taccaatttcctggagttcagaggcctaatttaaatcctcaatatgggcacgatggatca
aggaatttcttgaaagatcatggtgaacatagtcgagccacgtctccacctgctacatct
cacattctttccagaatgggaactgatgctgttgagattggtcgatcacaagattcaaaa
agaaaaagtcggtcagatattcttcctgaccagaatatggggttttctcgaagaaatcaa
tcgccagtatcaggttttgagaatggaaacttggtagatggttttcagccactttctagc
cgaacttggatgcgctctccgtcttctgcggagaataatccggtgaggtcgaggagcaat
cccaatcagttgattcatcaagaacaaaccggaaactcgtcattcccctatgcacatgaa
gtagctgaaattcaggaagctactagaagaaagtcttcggctgtagcaccttctgataaa
ccccttggagatgaccccatattgtctcaacatgactctcaaaggttttcgacatctcca
cctacgtcaggcacaaagtcatatacactttcaagaagttcagattctcaatttcctgga
cagccctcctctgtaaatagtttcaataatgcgcgtaagacaaacagttcacctgcaaca
aaaaggacgagatctccacctgtatatccaattgaagaggatatcccgcgaaactctttc
ccttctcaagattgtacagaaggagaagagcaagccagggcaaagagactggcccgcttc
aagggtgaactggagcctattgcagaccgacctgttgatattcaacttactaaatcacct
gtaaataaaactatgaagcctctggacaacaaacaaacattcaattcgcttgaatcaagt
agggatgccctgaagggagatgccttgcctgattatgaaaactcggagcagccctctctt
atcattggagtatgccctgacatgtgtcctgagtcagaacggggggagcgtgagaggaag
ggtgacttggaccattatgagcgtgtggatggagataggaaccagacaagcaaatccctt
gctgtgaagaaatatactaggacggcggagcgagaagcaattttgatacgaccaatgcca
atcctgcaaaatacaatggaatatttgctgagtttgctagaccgaccttacaatgaaaac
tttcttggcatgtacaatttcttatgggataggatgagagctatacgtatggatctaaga
atgcaacatattttcaaccaagaagctattactttgctggagcaaatgattagacttcac
atcattgcaatgcatgagctatgtgaatatactaaaggagagggcttttcggaggggttt
gatgcacacctgaatattgagcagatgaacaagacatctgttgagttgtttcaaatgtat
gatgatcacaggaagaaaggaataactgttcctacagaaaaagagtttcgtggctattat
gcccttctcaaactcgacaagcatcctggctataaggttgaaccttcagaactttctctt
gatcttgccaatatgactccagaaataaggcaaacttcagaagttctctttgcccgcaat
gtagccagagcttgcagaactggcaacttcatcgccttctttcgccttgcacggaaagca
agctatcttcaagcatgtctaatgcatgctcatttttcgaaactaagaactcaggcgctt
gcctctctgcactcgggtctccaaattaatcagggtctcccagtttcagatatgtcaaat
tggatagggatggaggaagaggacatagaagccctgttggagtaccatgggttttcgata
aaggtttttgaagagccatacatggtaaaaaatgacctatttctccatgctgataaggat
tacaaaacaaaatgctcaaaacttgttcacatgaaaaagtcaagaaccatagtggaagat
gtttctgctcccacagtagtggaagatgtttctactccctttccattgccttccttgatc
acagaagcaactatcggaaatcaacagtgtattaccgcccataaacacgaaatgccgcct
gcgagaagtcttaagaaacaaacatcaatgcgtctatttgataaagaagtggctgactcc
aagacttccctcttagcagaggaggacaagccaatggggacatttgttatgaatccacca
gggccattcgttataaatccagtggtgcatcaagagaaacaaaatgaccttacatcagct
ggtggatttcattctcccgtgaagctatattctccttttggttcccctaaatttcctcaa
actaaatcgtcgaatttggagaaacaacctaatgacgatcgcatcggtatgtctcctggg
gaaattaaattttcaatcataggggatgtatatacgaatcatgtgcctggaccagctttg
caacaaagtccgaagtctatgccaatggagattatgcctgtaactaccattgcagagtgt
ccgacaagtgtagaaaacaaatatgctttggaagaatcagtaccggaggctgcaatgatt
tgtaccttggaaaaggagttcaatgacattgacgaggaagacgaggatgaggatggggtc
atcttaaatcagtatgatgaggaagtggcgaaagcaaaactcaagttgatcataagatta
tggaagcggtggtcttcacgtcaaagtgaattgcgggagcgtcgacagttagcagcagct
gctgcactgaattcactatccctgggtactcctatccgatttagcaaaactgatcaatcg
agggcgtgtggtgagtttaacattgatcaagccatgaggaggagatttgaagaacgtgag
aaatcatggtcaaggctgaatatttctgatgtgatagctgatatactagttggaaggaat
ccagaatcaaaatgcataagctggaaggtcgtcttatgtactcagactaaatcagtaaac
tcatcatcttctgcaagtcaggttacgcattcagcagccagtcgatggttatcatcaaag
cttatgcctcatgcagaacatagtagtctcaacgatgataatctgctgttttcagctccc
ggcgtgtctgtatggaacaaatgggttgcaaatgggtctgatatagatttcacatgctgt
ctctcagtagctagggatgtggaggctgagaatgatatgtgtgaaacaacatgtggtgca
agtgcagtccttttccttgcatctggaggcctccctttgaatcttcagagagaacagctt
aacctcattcttgaatcagtacccaacggttcagttcttccccttctcgtagtaattagc
tcatgcaatggggaacacatggagcctgataccgacattgtctcgggattaggcctccat
gatattgacaagtcaaagatagcaagcttttccatcgtttctattgctaataagtcccaa
aaggggcaggaagttcattttttcaatgattcacggctaagagatgggtttaaatggcta
gcaagcaattcacctctgcaaccaaatcttcatcatgttaaactccgggaactgtttctg
acccatttcagtttttccttggagttgcttaagcagatgccagatcaggaggttggtcct
aacatctgcatatcagccttcaacgacgcattggaaacatcacgaagaaacatcacttct
gctgctgaagcaaatcccatcggttggccttgccctgagacaatgttgctcgaggataat
agaaaagaatgtttaatggtcaagcggtatcttcccaacctggactggagcagtgcagag
aacgtcgaactactcagttccgtgctagagaattgtaagctcccagattttgaagatgat
ttgacatggctaaccgtaggatgtgcttctggtgctgagatagagaaccacacgcaaagg
cttgagggatgcttaattgagtacttaacacagagaagcaatcttatgggagtctcatta
gctactaaagaaacaggagtgatgctagaaagaaacactagactcgaactccataactca
agccgctaccatatcaccccgagatggattggtatcttccagaggatcttcaactggcgg
ataatgggtttgtttgatgcatcatcttcctcagcttacgtactgaagtctgatctcaac
atgtcaacttcaagctatgcagataaattcttggctgaagatgcatcatacccatcttgt
cctccaaatcttccattgcttcatgaaatgatagaaatcagctgcagccccttgaagtcg
cctcctccatatgatgacaaagcccagagagttgttgagacaggaatgctcatcgatgat
catagagatatagaggaatcgatgttggaaaagaacagagaagcttgtcgaggtattgat
ctgatgataactgaggatgatgagttaggcgagagatcatggagaagtaaaggtagagaa
gcggcagagaagaagacgatagagaagagagagagtgagagattagatgaattgttggaa
aaatgtaacatggtacagaatagcatagccgagaagctctgtatttacttctga
DBGET
integrated database retrieval system
