Arabidopsis thaliana (thale cress): AT3G08620
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Entry
AT3G08620 CDS
T00041
Name
(RefSeq) RNA-binding KH domain-containing protein
KO
K14945
protein quaking
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT3G08620
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
AT3G08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STAR_dimer
KH_1
KRR1-like_KH2
Motif
Other DBs
NCBI-GeneID:
820009
NCBI-ProteinID:
NP_187474
TAIR:
AT3G08620
UniProt:
Q8GYR4
A0A178V6Y5
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All DBs
Position
3:2617707..2620670
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AA seq
283 aa
AA seq
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MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI
FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAME
WQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG
SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD
YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtctgtataattataataacttctcaccttctagagccgcttctcctcagatt
agaaccccttcctccgatgttgacagtcaatacatatctcagttgttagcagagcatcaa
aagcttggacctttcatgcaagtcttacccatttgtagccgactcttaaatcaagaaatt
ttccggatcaccggaatgatgcccaaccaaggatttaccgattttgataggttacggcat
cgaagtcctagtccaatggcttcaccaaatcttatgtctaatgtttccggtggtggatta
ggtggttggaatggtcttccaccagagagaattggtggtcctcatggaatggcaatggag
tggcaaggtgcgccagctagcccaagttcatacccagtgaagcgtattttgcgtttagat
cttccagttgatacctatccgaatttcaattttgttggaaggcttctgggtcctagaggg
aattcattaaagcgtgtggaagcaactacgggttgccgtgtgtatattagagggaaagga
tcaattaaggatcctgaaaaagaagagaaactgaaagggaagcctggctatgagcatctc
aatgagcagttgcatatcctcattgaggctgatcttccaattgatattgtggatataaag
ctgcggcaggcccaagaaataatcgaggagttggtcaagcctgtggatgagtcgcaggat
tacatcaagaggcagcagttgcgagagctagcgttgctgaattcaaacttgagagaaaac
agcccaggaccaagcggtagtgtctctcctttcaattcaaatgcaatgaaacgcccaaaa
acagggcgttaa
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