Arabidopsis thaliana (thale cress): AT3G19080
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Entry
AT3G19080 CDS
T00041
Name
(RefSeq) SWIB complex BAF60b domain-containing protein
KO
K15223
upstream activation factor subunit UAF30
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT3G19080
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
AT3G19080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
BDV_P24
Myc_N
Motif
Other DBs
NCBI-GeneID:
821442
NCBI-ProteinID:
NP_001327035
TAIR:
AT3G19080
UniProt:
A0A1I9LR29
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All DBs
Position
3:6595344..6599089
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AA seq
444 aa
AA seq
DB search
MVSDLDLVTRLREILGSSDLNTATPASVRRQLEADFGVDLTDKKAYIRDQIDTFLESNGA
VEDKPESPKVEEYINADEIKAEIEGGDGEDLDGDGSGSEEEKEERPVKAKKRGGGITKVS
QLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHSLFRVKTINMF
QMNKALTKHIWPLGDGDGCANDVKEEDEDEASEGTDKKGEQSEEVEENKEEESEEQEVRS
LRKRKRKKPAKSVEKPKRKGGGGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENN
LQDPNDKRSIICDESFRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQK
MESDGDTDSEEPNEKDKKQKKEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHN
DLQVCHLLSTLCFFLLTCFFTPFS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgacttggacctcgtgacccgactccgtgagattctcggtagctccgacctg
aacacggcgactccggcaagcgtccgtcgtcagttggaggcggatttcggtgtggacttg
acagataaaaaagcgtatattagggatcaaatcgatacttttctcgagagcaatggcgcg
gtagaagacaaacctgagagtcccaaggtagaagaatacattaatgccgacgaaatcaag
gcggaaattgaaggaggcgatggagaagacctcgacggagatggaagtggaagtgaggaa
gagaaggaagaacggccagtaaaggccaagaagcgaggtggtggcattaccaaagtatct
cagttatctccacaacttgagaaagttgttggagcatctcagttaggtcgaaccgaggtt
gtgaagaaaatgtgggcatatatccgagagaaggatttgcaagacccaaaggataggagg
aagatagtgtgtgacgagttgttgcattccttgttccgtgttaagaccattaatatgttt
caaatgaacaaggcattaaccaagcatatttggcccttaggtgatggagatgggtgtgct
aacgatgtgaaagaagaagatgaagatgaggcatcagagggaacagataagaaaggggag
cagagcgaagaagtggaagagaataaggaagaagaaagtgaagagcaggaagttaggagt
ttgcggaaacgcaagagaaaaaagccagccaagtcggtagagaagcccaagagaaaagga
ggaggcggctttgctaaagtttgcagcctctcgccagagcttcaggcgtttactggggtg
acagaattagccaggacagaggttgtgaaattgctttggaagtacataaaggagaacaat
ttacaagatccgaatgataaacgctctataatatgcgacgaatcatttcgatctctgttc
cctgtcgagtccatcaatatgtttcaaatgaataaacagctaacaaagcacatatggcct
ttagaggataatgcaggagaatcagttagctctaagtctccaaagaatggaaagcaaaaa
atggaatcagatggagacacagatagtgaggaaccaaatgagaaagataaaaagcagaag
aaagaagttcttgctccccttccactttcagatgctcttgtcaagttcttgggtgatgga
gaaaactcgctgtcgagggcggatgtggtaaagagattgtgggagtacataaatcataat
gatcttcaggtatgccatttgctctctacactctgttttttcttacttacctgcttcttt
acaccattttcttaa
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