Arabidopsis thaliana (thale cress): AT3G19210
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Entry
AT3G19210 CDS
T00041
Symbol
RAD54
Name
(RefSeq) DNA repair/recombination protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT3G19210 (RAD54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G19210 (RAD54)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
AT3G19210 (RAD54)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
821455
NCBI-ProteinID:
NP_188552
TAIR:
AT3G19210
UniProt:
Q0PCS3
A0A178VKI0
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All DBs
Position
3:complement(6652695..6658988)
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AA seq
910 aa
AA seq
DB search
MEEEDEEILSSSDCDDSSDSYKDDSQDSEGENDNPECEDLAVVSLSSDADRKSKNVKDLL
RGNLVVQRQPLLPRVLSVSDGAAVCRKPFKPPCSHGYDSTGQLSRRLSARKRFVPWGSST
PVVVALPTKLEASTNIERDEEEEVVCLPPDIEPLVLWQSEEDGMSNVTTIMVHSVLVKFL
RPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVK
KAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISY
ETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEE
FFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILR
RTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYITALK
KLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLS
RLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDP
TKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFL
STGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIHEK
MSCSRCQNDASGTENIEEGNENNVDDNACQIDQEDIGGFAKDAGCFNLLKNSERQVGTPL
EEDLGSWGHHFTSKSVPDAILQASAGDEVTFVFTNQVDGKLVPIESNVSPKTVESEEHNR
NQPVNKRAFNKPQQRPREPLQPLSLNETTKRVKLSTYKRLHGNSNIDDAQIKMSLQRPNL
VSVNHDDDFV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagatgaagagatcttatcgtcttccgattgcgacgattccagcgatagt
tacaaggatgattctcaagattctgaaggagaaaacgataaccctgagtgcgaagacctt
gcggtggtttctctttcatccgacgcagatcggaaatctaagaacgtaaaggatcttctg
aggggcaatctagttgtgcaacggcagccactccttcctcgggtgctttcggtgtcagat
ggagcggcagtttgtaggaagcctttcaaacctccgtgttctcatggttatgattccaca
ggacaactttctcgtcgcctttcagctcgaaaacggtttgttccttggggttcctcaact
ccggttgtggttgctttacctactaagctggaagcatcaaccaatattgagagagatgaa
gaagaggaagttgtttgtctaccacctgatattgaacctttggtattgtggcaatctgaa
gaagatggaatgagcaatgtaacaactatcatggtgcattcagtgcttgtcaaatttctt
cgccctcatcaaagagagggtgtccagttcatgttcgattgtgtttcaggattacatggt
tcggcaaatataaatggttgcattctggctgatgacatgggtttagggaagacattacag
tccattactttactatacacacttctttgtcaaggatttgatgggacgcctatggttaaa
aaggccattattgttacaccaacgagtcttgtcagtaactgggaagctgaaattaagaaa
tgggttggagacaggattcagcttatagccctctgtgagagcaccagagatgatgttttg
tctggaatagatagtttcactcgaccaagaagcgctttgcaggtacttatcatttcttac
gagacattccgaatgcactcatccaagttctgccagagtgaatcctgtgatcttctaata
tgcgatgaggctcataggttgaaaaatgaccagacacttacaaacagggctttggcttca
ttgacatgcaaacgtcgagttttgttgtctggaactcccatgcagaatgacttggaagag
ttttttgccatggtcaacttcacaaatccagggagtttaggtgatgctgcacactttcgc
cattattatgaggcacctattatatgtggaagagaacctacagccactgaggaagagaaa
aacttagctgctgaccgctccgcagaactgagttcaaaagtcaaccagtttattttgagg
agaaccaatgcattgctctcaaatcacctaccacctaagataattgaagtagtttgttgc
aagatgactactctccagtccactttgtacaaccattttattagctcgaaaaatcttaaa
agggcgcttgctgataatgcaaaacaaaccaaagttttggcttatataacagctcttaag
aagctctgcaatcatccaaagctaatctacgacacaataaaaagcggcaatcctggaact
gttgggtttgagaattgcttagagttcttccctgcagaaatgttctctgggagatctgga
gcatggacagggggtgatggtgcctgggtcgagctctctgggaaaatgcatgttctctcc
agacttttggccaacctacgtcgaaaaactgatgaccgcatagtccttgtatcaaactac
acacagacattggatctttttgctcaactctgtcgtgaaagaagatatccttttctgagg
ctggatggatcaacaacaatcagcaagaggcagaagcttgttaaccggttgaacgaccca
acaaaggatgagtttgcatttctcttaagcagcaaggcgggtggctgtggattaaattta
attggtgctaatcgacttgttttgttcgatcctgattggaatcctgccaatgataaacaa
gctgctgctagagtttggagggatgggcaaaagaaaagagtatatgtctacaggtttctt
agtactggaactattgaagaaaaggtttaccagcgccagatgtcaaaagaagggcttcaa
aaagttattcagcatgaacagacggataacagcacgagacaggggaacttactttctaca
gaggatctacgagatttattttccttccatggggatgttaggtctgaaatccatgaaaag
atgagctgcagcaggtgccaaaatgatgcctctggtactgagaatatcgaagaagggaat
gagaacaatgtagatgacaatgcttgccagattgaccaagaagacataggcggatttgca
aaagatgcaggatgctttaacttgttaaaaaactctgagagacaggtgggcactccattg
gaagaagatctaggaagctggggtcatcactttacctcaaaatccgttccagatgctata
ctgcaagcttcagcaggtgacgaggtgacgtttgttttcacaaaccaggtagatgggaag
ctcgttcccatcgaatcaaatgtcagtccaaaaacggtggagtccgaagagcacaatcgg
aaccaacctgtaaataagcgtgcctttaacaaaccacaacaaagacctcgggaaccgctg
cagccgttatctctcaacgagaccacaaaaagagtgaagttgtctacttataagcgttta
catggtaatagtaacattgatgatgctcagattaaaatgtctttgcaaagaccaaatcta
gtttctgtaaatcacgatgatgattttgtatga
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