Arabidopsis thaliana (thale cress): AT3G44490
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Entry
AT3G44490 CDS
T00041
Symbol
hda17
Name
(RefSeq) histone deacetylase 17
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03082
ATP-dependent chromatin remodeling
ath03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AT3G44490 (hda17)
03083 Polycomb repressive complex
AT3G44490 (hda17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT3G44490 (hda17)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
AT3G44490 (hda17)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
AT3G44490 (hda17)
HDAC complexes
Sin3A-HDAC complex
AT3G44490 (hda17)
BRAF-HDAC complex
AT3G44490 (hda17)
REST complex
AT3G44490 (hda17)
SHIP complex
AT3G44490 (hda17)
MiDAC complex
AT3G44490 (hda17)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
AT3G44490 (hda17)
Heterochromatin formation proteins
Other heterochromatin formation proteins
AT3G44490 (hda17)
Chromatin remodeling factors
NuRD complex
AT3G44490 (hda17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
823574
NCBI-ProteinID:
NP_190035
TAIR:
AT3G44490
UniProt:
Q9LXN8
LinkDB
All DBs
Position
3:16097479..16098599
Genome browser
AA seq
158 aa
AA seq
DB search
MAFSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISEN
DYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIP
DFDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDNDAS
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggctttctctatgcttttcacaggacatgctgaatgtgttaaattcgtgaagaagttc
aatcttcccttactggttacaggaggtggaggatacacaaaggagaatgtagctcgttgt
tggaccgttgagactggcattcttttggatacagaacttcctaatgagatttctgaaaac
gactacataaagtattttgcgccggatttttctttgaagataccgggtggtcacattgag
aatcttaataccaaatcatacatcagttccatcaaagtgcagattttggagaatttgcga
tacattcaacacgctccaagcgtacagatgcaggaggttccaccggatttctacataccg
gattttgatgaagacgaacaaaatccggatgtacgtgtggatcagcgttcacgggataag
cagatccagagggatgatgaatatttcgatggagacaacgataacgatgcatcgtaa
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integrated database retrieval system