KEGG   Arabidopsis thaliana (thale cress): AT3G44490
Entry
AT3G44490         CDS       T00041                                 
Symbol
hda17
Name
(RefSeq) histone deacetylase 17
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03082  ATP-dependent chromatin remodeling
ath03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    AT3G44490 (hda17)
   03083 Polycomb repressive complex
    AT3G44490 (hda17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT3G44490 (hda17)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     AT3G44490 (hda17)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     AT3G44490 (hda17)
   HDAC complexes
    Sin3A-HDAC complex
     AT3G44490 (hda17)
    BRAF-HDAC complex
     AT3G44490 (hda17)
    REST complex
     AT3G44490 (hda17)
    SHIP complex
     AT3G44490 (hda17)
    MiDAC complex
     AT3G44490 (hda17)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     AT3G44490 (hda17)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    AT3G44490 (hda17)
  Chromatin remodeling factors
   NuRD complex
    AT3G44490 (hda17)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 823574
NCBI-ProteinID: NP_190035
TAIR: AT3G44490
UniProt: Q9LXN8
LinkDB
Position
3:16097479..16098599
AA seq 158 aa
MAFSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISEN
DYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIP
DFDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDNDAS
NT seq 477 nt   +upstreamnt  +downstreamnt
atggctttctctatgcttttcacaggacatgctgaatgtgttaaattcgtgaagaagttc
aatcttcccttactggttacaggaggtggaggatacacaaaggagaatgtagctcgttgt
tggaccgttgagactggcattcttttggatacagaacttcctaatgagatttctgaaaac
gactacataaagtattttgcgccggatttttctttgaagataccgggtggtcacattgag
aatcttaataccaaatcatacatcagttccatcaaagtgcagattttggagaatttgcga
tacattcaacacgctccaagcgtacagatgcaggaggttccaccggatttctacataccg
gattttgatgaagacgaacaaaatccggatgtacgtgtggatcagcgttcacgggataag
cagatccagagggatgatgaatatttcgatggagacaacgataacgatgcatcgtaa

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