Arabidopsis thaliana (thale cress): AT3G54540
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Entry
AT3G54540 CDS
T00041
Symbol
ABCF4
Name
(RefSeq) general control non-repressible 4
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ath03012
]
AT3G54540 (ABCF4)
Translation factors [BR:
ath03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
AT3G54540 (ABCF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
AAA_28
AAA
MMR_HSR1
AAA_22
AAA_16
AAA_25
AAA_24
AAA_23
MeaB
RNA_helicase
DUF87
Dynamin_N
ABC_tran_Xtn
EssA
AAA_15
Motif
Other DBs
NCBI-GeneID:
824619
NCBI-ProteinID:
NP_001327731
TAIR:
AT3G54540
UniProt:
Q9M1H3
A0A178VD97
LinkDB
All DBs
Position
3:20189794..20192940
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AA seq
723 aa
AA seq
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MGKKKSDESAATTKVKPSGKDASKDSKKEKLSVSAMLAGMDQKDDKPKKGSSSRTKAAPK
STSYTDGIDLPPSDEEDDGESDEEERQKEARRKLKSEQRHLEISVTDKEQKKREAKERLA
LQAAESAKREAMKDDHDAFTVVIGSKTSVLEGDDMADANVKDITIESFSVSARGKELLKN
ASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDEKSALNAVV
SANEELVKLREEAEALQKSSSGADGENVDGEDDDDTGEKLAELYDRLQILGSDAAEAQAS
KILAGLGFTKDMQVRATQSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEE
YLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQNLHFYRGNFDGFESGYEQRRKEMNKKFD
VYDKQMKAAKRTGNRGQQEKVKDRAKFTAAKEASKSKSKGKTVDEEGPAPEAPRKWRDYS
VVFHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLL
NLLAGDLVPTEGEMRRSQKLRIGRYSQHFVDLLTMGETPVQYLLRLHPDQEGFSKQEAVR
AKLGKFGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALAD
ALDEFTGGVVLVSHDSRLISRVCAEEEKSQIWVVEDGTVNFFPGTFEEYKEDLQREIKAE
VDE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagaagtcagacgagagtgctgctaccacaaaggtgaagccaagtgggaaa
gatgcttcgaaagattctaaaaaagagaaattgtcagtctcggctatgcttgcaggcatg
gatcagaaagatgataaaccgaagaagggctcatcatctagaaccaaggctgctccgaaa
tctacatcttacactgatggcatagatcttcctccttctgatgaagaagacgacggtgaa
tctgatgaggaagagagacagaaggaagcaaggaggaagctgaagagtgaacaaaggcac
cttgagatatctgtgactgataaggaacaaaagaagcgagaggcgaaagaaagattagct
cttcaggctgcagagtcggcaaagagggaggctatgaaggacgatcatgatgcattcacg
gttgttattggaagcaagacctcagtgcttgaaggagacgacatggctgatgcaaatgtt
aaggatattaccatagaatctttttctgtatctgctcgaggtaaagagcttttgaagaat
gcttctgtcaggatttcacatggtaaaaggtatgggttgatcgggccaaacggaatggga
aagtctacactgttaaagcttttagcttggaggaagattccagtgccaaagaatattgat
gttcttcttgttgagcaagaggtggttggtgatgaaaagagtgctctgaatgcagttgtc
tctgccaatgaagagttggttaagctacgggaagaggctgaagctctgcagaagtcgtct
tctggagctgatggagaaaatgttgatggtgaggatgatgatgatactggagaaaagctt
gctgaactgtatgacaggctgcagattttagggtcagatgctgctgaagcacaggcatcc
aaaattcttgcggggttaggtttcacaaaagatatgcaagtgcgtgcgactcagtccttc
agtggtggctggaggatgcgaatatcattagctagagctctgttcgtgcaacctaccctt
ttgctgttagatgaacccactaaccatcttgacctgagagctgttctatggttagaggag
tatttgtgtcgctggaagaagacactagttgttgtttcacatgaccgggacttcctcaac
acagtctgcacggagataatacatctccatgaccaaaatctccacttctaccgtggtaat
ttcgatggttttgaaagcggatatgagcagcgtcgcaaggagatgaacaaaaaatttgat
gtctacgacaaacagatgaaagcagcgaagaggactggaaaccggggtcaacaggagaag
gtaaaggacagggccaagtttactgctgcaaaagaagcatccaagagtaagtcaaagggc
aagacagtggatgaagaaggcccagcaccagaagctccaaggaagtggagagattacagt
gtggtgttccacttcccagaaccaactgagctcactcctcctcttctgcagttaattgag
gttagcttcagctatcccaacaggccagatttcagactctcgaatgttgatgtaggtatc
gatatggggacacgggttgcgatagttgggcctaacggagcaggaaagtccactctatta
aatcttcttgcgggagatttagttccaacagagggtgaaatgagaagaagccagaagctg
aggattggcaggtattctcagcattttgttgaccttttaacaatgggggaaacaccggtt
cagtatctccttcgtcttcatcctgaccaagagggatttagcaagcaagaggcagtgcga
gcgaagctaggcaagtttgggctaccaagtcacaatcacttatctccaattgcgaaattg
tctggaggacaaaaggctagggttgtgttcacctcgatctcaatgtcaaaaccacacatt
ttgcttctggacgagcctacaaatcacttagacatgcagagtatagatgccttggcggat
gcactagatgagttcacaggtggagttgtgttggtgagtcacgactcgagactcatatca
cgtgtatgtgcggaagaggagaagagtcaaatttgggttgtagaagacggaacagtgaat
ttcttcccaggcacatttgaagagtacaaagaagatctccaaagagaaatcaaagcagaa
gttgatgagtga
DBGET
integrated database retrieval system
