KEGG   Arabidopsis thaliana (thale cress): AT4G16310
Entry
AT4G16310         CDS       T00041                                 
Symbol
LDL3
Name
(RefSeq) LSD1-like 3
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: Amino_oxidase SWIRM NAD_binding_8 DAO Thi4 HI0933_like Pyr_redox_2 FAD_binding_3 FAD_binding_2 FAD_oxidored Pyr_redox Pyr_redox_3 Lycopene_cycl AlaDh_PNT_C SRI MurD-like_N GIDA NAD_binding_9 Med26 Enoyl_reductase Shikimate_DH NAD_binding_7
Other DBs
NCBI-GeneID: 827325
NCBI-ProteinID: NP_001319957
TAIR: AT4G16310
UniProt: F4JLS1 A0A654FPU5
LinkDB
Position
4:9217988..9226280
AA seq 1628 aa
MDGKEKKSGSKRGSKVFQFDDDADDDEPIGSLLEIMKHKSSKKDKVETESTGKQRQKQVV
EKKLSALGKDSEDMDDTLASFRKRLKGNKKGVESGTSRVRNHEGVDTVTNSNLKPIEEAN
KNEVQSVLLRENGASNSIQKCASETGTLLHKFSGKDKAASPSHEKVETVSSEKEADVFHQ
ITKEESEIPMSEKAVELSRVSVPMPDVHGEVNCTIAPDKHIHLGEPTSESGYYREKNLVM
CDCGTQFNFEDRSFESNTQVTLCQKCKYSSHHNASNGGGIQVNTLEDGTAQASPVSIIPC
EDENFRGDAISLPNSGKPSTLQRPERIAKKRKLGNMVYEGDVKWENEQGFLDCQSDKSFK
GSDKCGFVPSISKEIEIGRAAAVTAGLKAQSVSPIEKIILKEVLKRKGSNQEYLVCRNSI
LGLWSKNVSRILPVTECGVTGGPSESELPSASLIREVYKFLDQRGYINAGISSVNGKAAS
STNQDYDLLQGRQLEESSMASVADSEEGVAFILGQVKAVESTSEGKKCALQNDERDLVGC
ATSEMLESISKKCEASIIDDNKRSVSMNALQDSTASNVEKHPETFSVAKPALSSTLSSAH
SNQMRGRDCVPCEVIDEKKVIVIGAGPAGLTAARHLQRQGFSVTVLEARSRVGGRVFTDR
SSLSVPVDLGASIITGIEADVPSERMPDPSVLVCNQLGLELSVLHGFCPLYDTVTGKKVP
AELDDALQAEFNSLIDDVDLLVEEIGKERANKMSLEDGLEYGLQRLRMPHDKVNIDKFGL
LNSSSKTGIRGPFMQDESWKDDFLNPLERRVMNWHFAHTEYGCAAVLKEVSLPHWNQDEF
YGGFGGPHAMIKGGYSRVVESLAEGLDIHLNKIVSDVSYVSDVSAMDNSKHKVRVSTSNG
CEYLGDAVLVTVPLGCLKAETIKFSPPLPDWKYASIKQLGFGVLNKVVLEFPTVFWDDSV
DYFGATAEETDLRGECFMFWNVKKTVGAPVLIALVVGKAAFEYTNKSKSEHVNHAMMVLR
KLFGGDLVPDPVASVVTDWGTDPYSYGAYSYVAIGASGEDYDVLGRPVQNCLFFAGEATC
KEHPDTVGGAMMTGVREAVRIIDILRSGNDYTAEIETLEKAQRKSVPVRDEVRDLIKRLE
VVELSNVLARQSLLRNMFFSAKTTVGRLHLAKELLNLPGETLKSFAGTKEGLAVLNSWIL
DSMGKNGTQLLRHCVHILVRVTSDLFALRLSGIGKTVKEKVCAHTSRDIRAIASQLVNVW
LDLYRKEKANSGKKSLRQANTTNTSRIRRKLNSPDTDSKGKLSNGNDVKTDEEFEDNQLP
MSEEEKAVFAEAEAARAAAEAAAKAFSEAYHNTSLQLPKIPSFHKFARREQYAKMDESDF
RKKFPGNVLGRQDCMSEIDSRNCKVRDWYDFPASCLDLDSARIPVDNYSQPSHSNELVSH
SKFRECSGESVAADTSFLTGAWVDTGGSSDGFKDSQAIDRWQSQAAAADPEFFNRTLHIK
DEEDSIACSTGPPSWKHDQRANECSVSQVTVNKEPHKNHIRSADRLKQGVVDFVASLLMA
PYRAKKIDRDVYKSIMKKTATKVMQHTTDVEKAMAVTQFLDSKRKNKIRDFVDKQVDKYM
VIPQVPKP
NT seq 4887 nt   +upstreamnt  +downstreamnt
atggatggtaaggagaagaaatctggttccaagagaggatctaaggtttttcagtttgac
gatgatgctgatgatgatgaacctattggatctctcttagagattatgaagcataaaagt
tccaagaaggataaggttgagacagaaagtactggtaaacagaggcagaaacaggttgtg
gaaaagaagctgagtgctttgggcaaggattctgaagatatggatgacacattagccagt
tttaggaagaggttgaagggtaacaagaaaggtgttgaatcaggaacctcaagagttagg
aaccacgagggtgttgatactgtaacaaattctaatttgaaaccaattgaggaagccaac
aaaaacgaggtgcagagtgtattacttagggaaaacggtgcttctaattctattcaaaaa
tgtgcttcagaaactggaaccctcttgcataagttttctggtaaagataaggcagcctct
cccagtcatgaaaaagtagaaacagtatccagtgagaaggaagcagatgtctttcatcaa
attacaaaggaggaatccgagataccaatgtcagagaaggctgtggagctatccagggtg
tctgtccccatgccagatgtccatggcgaagttaattgtactattgctcctgataagcac
atacacttgggagagccaacttcagagtccggttattaccgagagaagaatttagttatg
tgtgattgtggtacccaatttaattttgaggatcgttcctttgagtctaatactcaggtt
actctctgtcaaaagtgcaagtattcttcacaccataatgcttctaatggaggtggtatt
caagttaatactctagaagatggaactgctcaagcttcgccggtttctataattccctgc
gaagatgaaaatttccgaggggatgcaatttcactacctaattctgggaagccatcgacc
ttgcaacgcccagagcgtattgctaaaaagcgtaagcttggaaacatggtgtatgaagga
gacgtgaaatgggagaatgagcaaggctttcttgattgtcaaagtgacaagtcctttaag
ggaagcgacaagtgtggttttgttccatctatttccaaggaaattgaaattggtagagca
gctgcggtaacagctggacttaaagcccagtcagtaagtccaattgagaagattatactt
aaagaggtgttgaagcgcaaaggtagcaatcaggagtacctagtttgcaggaactctatc
ttaggcctgtggagtaaaaatgtcagccgaatcttacctgtcactgaatgtggtgttacc
ggaggcccttctgagagtgaattgccttcagcttcccttatcagagaagtctataagttt
cttgatcagagaggttatataaatgctggaatttcatctgtgaatggaaaggcggcatct
tcgactaatcaagactatgatctcctccaggggagacagcttgaagaaagttctatggct
tctgttgcagattctgaagagggagttgcttttatccttggtcaggtcaaagccgttgaa
tcaactagtgagggtaagaaatgtgctctccaaaacgatgaaagggacttggtaggatgt
gcgacctcggaaatgttggaatctatcagcaaaaaatgcgaagcaagcattattgatgat
aacaaacgttctgtgagcatgaatgctttacaggatagtactgcatctaatgttgaaaag
catcctgaaacattttcagtagcgaagcctgctttgtctagcacactctcctctgcacat
agtaatcaaatgagaggaagggactgtgttccatgtgaggttatagatgagaagaaagtt
atagtaattggagctggtcctgctggattaacagcagcacgtcatttacagcgccagggt
ttttctgtaaccgttcttgaggcaaggagtagagtaggtggtcgtgtatttacagaccgg
tcgtctctttcagttcctgtggatcttggggctagcataattacaggcattgaggctgat
gtgccatctgaaagaatgccagatccatcggtattggtctgtaaccaattaggtctggag
ttgagcgtgttacatggattctgtcctctttatgatactgtaacagggaaaaaggttcct
gcagaattagatgatgctctacaagcagagttcaacagtctaattgacgatgtagatttg
cttgttgaggaaataggcaaggaaagagcaaataaaatgtctcttgaggatggtctagaa
tatggccttcaacggctgagaatgccacatgacaaggtgaacattgacaaatttgggctt
ctcaattcaagctcaaaaacgggcatcagaggtccctttatgcaggatgaaagctggaaa
gatgattttttgaatcctttggagcgaagagttatgaattggcattttgctcacacagaa
tatggttgtgctgctgtcctcaaggaagtttcgcttcctcactggaatcaagatgagttt
tatggcgggtttggagggcctcatgctatgattaagggtggttatagccgagttgttgag
tcgcttgcagaaggactggacattcacttaaacaaaatagtttcagatgtatcttatgtc
tctgatgtatctgccatggataacagcaagcataaagtcagagttagtacatcaaatggc
tgtgagtatcttggagatgctgttctggtaactgttccacttggatgcttgaaagcagaa
actattaagttttcaccacccttgccggactggaaatatgcgtcaatcaaacaacttggt
tttggagttctaaataaagttgttttggagttcccaacggtattttgggatgatagtgtt
gattactttggggcaactgctgaggaaacagatctaagaggtgagtgctttatgttttgg
aatgtcaaaaaaactgttggtgctcctgtcctgatagctttggtggttgggaaggctgct
tttgaatatacaaacaagagtaagtctgagcacgtgaaccatgcaatgatggttcttcgg
aagctttttggtggggatctggttcctgatcctgtcgcctcggtagttactgactggggc
actgatccttacagttatggtgcctactcgtatgttgctattggtgcttctggtgaagat
tatgatgtattgggaaggcctgttcagaattgtttgttttttgctggtgaggcaacatgc
aaagagcatcctgacactgttggtggtgcaatgatgactggagtccgggaagctgtgcgt
ataattgatatacttagaagtggaaatgattacacagccgaaatagaaacactagaaaaa
gcgcagaggaaatctgtacctgtaagggatgaagtcagagacctaataaagaggctggaa
gttgttgagctgtctaatgtgctagccaggcaatcattgctacgaaacatgttcttctct
gccaaaacaactgtcgggcgtttgcatttagccaaggagttgcttaacctacctggtgaa
accttgaaatcctttgcaggtacaaaagaagggcttgcagtgctgaactcttggatcctg
gattcgatgggtaagaatggaacccagcttttacgtcactgtgtacatattcttgttcga
gttacgagtgacctctttgccttgaggctatcaggtattgggaagactgtgaaagaaaag
gtttgtgcacacacgagccgtgatattcgtgccattgcaagtcagcttgttaatgtgtgg
ctggatctataccggaaagaaaaagctaatagtggaaagaaatcgttgagacaagcgaat
actacaaacacctctagaataagaagaaaactgaatagtccggacacagacagtaaggga
aagctgagcaatggcaacgatgtgaaaacagatgaagagtttgaggacaaccagctacct
atgtcagaggaagagaaggctgtgtttgctgaagctgaggcggctcgtgcagcagcagaa
gcagctgcaaaggcattttctgaggcctatcataatacttcattgcagcttcctaagatc
ccctcatttcataagtttgccaggcgagagcagtatgcaaagatggacgaatctgatttc
aggaaaaagtttcctggaaatgtcttaggaagacaagattgtatgtcagagattgactcg
aggaactgcaaagttagggactggtatgattttcctgcctcgtgccttgaccttgacagt
gcaaggattccagttgataactattcacagcctagccattcgaatgagcttgtatctcat
tcgaagttcagagaatgttctggagaaagtgtggctgcggataccagtttcttaactggg
gcatgggttgatactggtggtagtagcgatggtttcaaggattctcaggctatagataga
tggcaatctcaagctgctgctgctgatcctgaatttttcaatcgtactttgcatataaag
gatgaagaagattcgattgcttgttcgactggccctcctagttggaagcatgaccaacga
gcgaatgaatgttccgtgtcacaggttacagtgaataaagagccacataaaaatcatatc
cggagtgcagatcgtttgaaacagggagttgtagattttgttgcatcgttgcttatggcc
ccgtatagagcaaagaaaattgatagagatgtatacaagtcaattatgaagaagacagca
acaaaggttatgcaacatacaacagatgtggagaaagctatggctgttacacagttcctc
gactcaaagcggaaaaataagattcgtgactttgtggacaaacaagttgacaagtacatg
gtgatacctcaagttccaaaaccttga

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