Arabidopsis thaliana (thale cress): AT4G22285
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Entry
AT4G22285 CDS
T00041
Name
(RefSeq) Ubiquitin C-terminal hydrolases superfamily protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT4G22285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G22285
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
AT4G22285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
5008155
NCBI-ProteinID:
NP_001078426
TAIR:
AT4G22285
UniProt:
Q8H148
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All DBs
Position
4:complement(11778749..11782695)
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AA seq
541 aa
AA seq
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MKGEREVKNGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPLANTYDDDDEEEENEQKK
SQARGNGVAKGEGNGNKVKGEAQEEVDDDEDDDVSKGKGKHSRHVEVRRDCPYLDTVNRQ
VLDFDFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYC
LPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTE
FVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQ
AVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEFQGN
ENKEISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARM
RYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSK
YNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQEE
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgaaagagaagttaagaatggtgtttctgaggaagagagagaagtgaagagg
aagagagtgatggaacggtctgattcaccacctccaccactaggtttcaacaatcctctt
ctgccgttggctaatacttacgatgatgatgatgaggaagaggagaacgagcagaagaaa
tcgcaagctcgtggtaatggagttgcgaaaggggagggaaatggtaacaaagtgaaagga
gaagctcaagaagaggtcgatgacgacgaagatgatgatgtctcgaagggtaagggaaag
cattcacgccatgttgaagttcgccgtgattgtccttatcttgataccgttaatcgtcag
gtgttggattttgattttgagaggttttgctctgtgtccttgtcaaatctgaatgtgtat
gcgtgtcttgtttgtgggaagtacttccaaggaagaagccagaagtctcatgcttataca
catagcttggaagcaggacaccacgtttacatcaatcttctgacagagaaggtttattgt
cttcctgatagttacgagatcaatgacccttctttggatgacattcgccatgttttaaac
ccaaggtttagtagagcacaagtaaacgagcttgacaagaataggcagtggtctagggct
cttgatggctccgactatcttccaggaatggtggggttgaacaacatacaaaagacagag
tttgtgaatgttacaatccagtcgttgatgagagttactcctctaaggaatttcttcctc
attcctgaaaattatcagcactgcaagtctcctcttgttcaccgttttggggaactaact
cgcaagatttggcatgctcgaaactttaaaggacaagtgagtccacatgaattcttgcaa
gctgtcatgaaagccagcaagaaacggtttaggattggccaacaatcagatccagtagag
tttatgtcgtggctcctcaacactttgcacatggatcttagaacttcaaaggacgccagc
agtatcatccacaagtgcttccagggtgagttggaggttgtgaaagagtttcaaggcaat
gaaaacaaagaaatctccaggatgtcttttctgatgctcggtctagatttgccaccgcct
cctcttttcaaagatgtcatggagaaaaacattattccgcaggttgctctatttgattta
ttgaagaagtttgatggagaaactgtgacagaggtggttcggcctaagctggccagaatg
agataccgtgtaatcaaatctcctcgttacttgatgttccatatggttcggttcaagaag
aataacttcttcaaagagaagaaccctaccttggttaacttcccagtgaaggacatggag
ctgagggattacataccatcattgcctagagcaccagaaggcgagaatgtgtgttcaaag
tataatctaatcgctaacattgtacatgatggtaagcctgaggacggatacttcagagtc
tttgtgcagcgcaagtcacaagaactatggtacgagatgcaggatcttcatgttgcagag
acacttccccagatggtagaactatcggaagcatacatgcagatatatgagcaggaggag
gaatag
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