KEGG   Arabidopsis thaliana (thale cress): AT4G23850
Entry
AT4G23850         CDS       T00041                                 

Symbol
LACS4
Name
(RefSeq) AMP-dependent synthetase and ligase family protein
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00061  Fatty acid biosynthesis
ath00071  Fatty acid degradation
ath01100  Metabolic pathways
ath01212  Fatty acid metabolism
ath04146  Peroxisome
Module
ath_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    AT4G23850 (LACS4)
   00071 Fatty acid degradation
    AT4G23850 (LACS4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    AT4G23850 (LACS4)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ath01004]
    AT4G23850 (LACS4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT4G23850 (LACS4)
Enzymes [BR:ath01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     AT4G23850 (LACS4)
Lipid biosynthesis proteins [BR:ath01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   AT4G23850 (LACS4)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   AT4G23850 (LACS4)
  Exosomal proteins of breast cancer cells
   AT4G23850 (LACS4)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C EIAV_GP90
Other DBs
NCBI-GeneID: 828484
NCBI-ProteinID: NP_194116
TAIR: AT4G23850
UniProt: Q9T0A0
LinkDB
Position
4:complement(12403454..12408421)
AA seq 666 aa
MSQQKKYIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPDPIEGMDSCWDVFRMSVEKYPN
NPMLGRREIVDGKPGKYVWQTYQEVYDIVMKLGNSLRSVGVKDEAKCGIYGANSPEWIIS
MEACNAHGLYCVPLYDTLGADAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVV
SFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKG
VMISNESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFW
RGDVKLLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFIFDSAFSYKFGYMK
KGQSHVEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGL
TESCAGTFVSLPDELGMLGTVGPPVPNVDIRLESVPEMEYDALASTARGEICIRGKTLFS
GYYKREDLTKEVLIDGWLHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIYG
EVQAVDSVWVYGNSFESFLIAIANPNQHILERWAAENGVSGDYDALCQNEKAKEFILGEL
VKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDEMYKTINA
KFASRG
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgtcgcagcagaagaaatacatcttccaagttgaagaaggcaaagaaggtagcgatgga
agaccatcagttggtccagtgtaccggagtatctttgccaaggacggatttcccgacccg
atcgaaggaatggatagttgttgggatgttttccgcatgtctgttgagaagtatccaaac
aatccaatgctgggacgccgcgagattgtagatggaaagccgggtaagtatgtctggcaa
acataccaagaagtctacgacattgtcatgaaacttggaaattctctcagaagtgttgga
gttaaggacgaagcaaaatgtggtatctatggtgcaaattctcctgagtggattatcagc
atggaggcttgtaatgcacatggactctattgtgtaccgttatatgatacactaggtgct
gatgctgtggaattcatcatttcccattcagaggtttcaattgtctttgtggaagagaag
aagatctctgagttgttcaagacatgcccaaactcgacagagtacatgaaaactgttgtg
agcttcgggggtgtctcacgtgaacaaaaagaagaagctgaaacttttgggttggttata
tatgcttgggatgaatttttgaagctgggtgaaggaaagcaatatgatctcccaatcaaa
aagaaaagcgacatttgcacgattatgtatacgagtggaaccactggtgacccaaaggga
gtgatgatatctaacgaaagcattgtgactctaatcgctggagtgatccgtctactgaaa
agtgctaacgaggctctgactgtgaaagatgtgtatctttcttatcttcctcttgcccac
atctttgaccgagttatcgaggagtgtttcattcaacatggtgctgcaattggcttctgg
cgaggggatgtaaaattgttgatcgaagaccttgctgagcttaaaccaactattttttgt
gctgtacctcgtgtcctggatagagtatactcaggtcttcagaagaagctttctgatggt
ggattcttaaaaaagttcatatttgattctgcattttcctataaatttggttatatgaag
aagggacagtctcatgtggaggcctctccactttttgacaaacttgtgttcagcaaggtt
aaacaaggactcggaggcaatgtgaggattattctatctggagctgctcctcttgctagt
cacgtagagtcatttctaagagtggtggcatgctgtcatgttctccaaggatacggtctt
actgaaagctgtgctggaacttttgtctcgctgccagatgaactaggtatgctcggcaca
gttggtccaccagtgccaaacgttgatatacgccttgaatccgtccccgagatggaatat
gatgctcttgcgagtactgcacgtggtgaaatctgcattcggggaaagacccttttctct
ggttactacaaacgtgaagatctcacgaaagaggttctcattgatggatggctgcacaca
ggtgatgttggtgagtggcaaccagatggaagcatgaagataattgacaggaagaagaat
atctttaaactctcacaaggagagtatgttgcggtggagaacatagaaaacatatacggt
gaagtacaagctgttgattccgtgtgggtgtacggtaacagctttgagtccttcctaata
gctatcgccaacccaaaccagcatatccttgaacgctgggctgcagaaaacggtgtgagt
ggtgactatgacgctctctgtcaaaatgaaaaggcaaaggaattcattctcggagaactt
gttaaaatggccaaagagaaaaagatgaaagggttcgagatcatcaaggcgattcatctt
gacccagtgccatttgacatggaacgagatcttcttacgccgaccttcaaaaagaaaagg
cctcagttgctgaaatactaccagagtgtgatcgacgaaatgtacaagaccataaatgca
aaatttgcttccagagggtag

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