KEGG   Arabidopsis thaliana (thale cress): AT4G27040
Entry
AT4G27040         CDS       T00041                                 
Symbol
VPS22
Name
(RefSeq) EAP30/Vps36 family protein
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT4G27040 (VPS22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT4G27040 (VPS22)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT4G27040 (VPS22)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    AT4G27040 (VPS22)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT4G27040 (VPS22)
SSDB
Motif
Pfam: EAP30 CDK5RAP3 Exo70_C DUF3631 Exonuc_VII_L
Other DBs
NCBI-GeneID: 828812
NCBI-ProteinID: NP_001328604
TAIR: AT4G27040
UniProt: Q5M759 A0A178V291
LinkDB
Position
4:complement(13572885..13575639)
AA seq 250 aa
MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLSTFRSQLEEFARKHKNDIRKN
PAFRAQFHEMCANIGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSHNGGLISL
QELCNHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHN
QILELAQGQGFVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYWFPCVS
SVYSSIGSDT
NT seq 753 nt   +upstreamnt  +downstreamnt
atgcgacgacgaccaggaattggaggattacaaaaggccgcagctgctagggatcagtac
cggttactaggagaaaatgtagccaagttacggactgatatgatgaaagaacagctctcc
acgttccgttcccagcttgaagagttcgctcgtaaacacaagaatgacattcgtaagaat
cctgccttcagggctcagttccatgaaatgtgtgctaacattggtgtggatcctcttgct
tctaacaagggtttctgggctgagctccttggtattggtgacttctactatgaacttgga
gttcagattattgaagtttgcatgcttacaagatcacataatggaggtttgatcagcttg
caagagctctgcaaccatcttcgtcagagaaggaagaaagaccgtgaagctgtgactgaa
gatgattgtcttcgagctattagcaagctaaaggtattgggtagcggatttgaggttatc
actattggcaagaaaaagcttgtccgttcagtacccacagagctgaacaaagaccataac
cagattttggagttggctcagggccaaggctttgtgattgtggaagaggtacaaagacgc
ctctcatggacatctggtcgcgttatagatgctctcgaaactttgttagaggagggcctt
gccatgatcgacaatggccataaagacggaaagtgtcggtactggtttccctgtgtttct
tcggtttactcatccatcggatctgatacttaa

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