Arabidopsis thaliana (thale cress): AT4G39370
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Entry
AT4G39370 CDS
T00041
Symbol
UBP27
Name
(RefSeq) ubiquitin-specific protease 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ath01002
]
AT4G39370 (UBP27)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G39370 (UBP27)
04121 Ubiquitin system [BR:
ath04121
]
AT4G39370 (UBP27)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
AT4G39370 (UBP27)
Peptidases and inhibitors [BR:
ath01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
AT4G39370 (UBP27)
Membrane trafficking [BR:
ath04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
AT4G39370 (UBP27)
Ubiquitin system [BR:
ath04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
AT4G39370 (UBP27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
830092
NCBI-ProteinID:
NP_568058
TAIR:
AT4G39370
UniProt:
Q9FPS0
A0A178UYU2
LinkDB
All DBs
Position
4:18306135..18308969
Genome browser
AA seq
494 aa
AA seq
DB search
MVSRRGSETKAIVCVLTDRIRISNQWVSHLSFAGLLGVAGFVFAQQHGLFRNLNNLKLFS
GREKDSGDDSFLVPGLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQ
LPLTFALSALLQELGTVGSRRSVSNPRKVMVTLTDYAKNFNLTSQQDAAEALLHLISSLQ
EEIVVCYRPSQSSNLSDILFSRNLRMLAPSEGLHGLMELKRWHKHLRGPFDGILGSTLMC
RTCSSQISLEFQFFHTLPLSPLLHHGGYNIMSGCTLEHCLKKFLNTEKVENYFCYRCWHG
AALKYLSVIGAAETEIEKLRSCGGEDQCDCKTSLHLQRMPWSNSYSHILKQLIIARFPKL
LCIQVQRASFNMFEEFKLSGHIAFPLVLNLSLFTPSSIGVNIEERIEMSSEYQKPEASKN
HGMYRLVTVVEHFGRTGSGHYTVYRSVRVFSQEEEEEDCDEDLSWFSISDSEVCRVSESD
VLGAEASLLFYERL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtttctagaagaggctccgagacaaaagcgattgtctgtgtcctcacggatagaatt
aggatctctaatcaatgggtttcgcatttgtctttcgctggtctacttggtgttgctggt
ttcgtatttgcccaacagcacggtctattccgcaacttaaacaacttaaaactcttctcc
ggtagagaaaaagactccggagacgattcttttctcgtacctggccttcaaaatctcgga
aataactgcttcctcaacgtcatcctccaggctctagcgagctgcaaagattttaggagt
tttcttcaatgggttctagaggatgcgagaggttcgttagcaggagaacaagaggaacag
cttcctcttacttttgctttgtctgctttattacaagagctcggcacagttggaagtaga
cgatctgtatctaaccctcgtaaagttatggtgacattgactgactatgccaaaaatttc
aatttgacaagccaacaggatgcagcagaagcccttcttcatcttatatcttctttgcaa
gaagagattgtagtttgttatcgccctagccaaagtagtaatctttcggatatacttttc
tctcgcaacttgagaatgcttgcgcctagtgaaggcctccatggtttgatggagctcaag
agatggcataaacatttgcgtggaccatttgatgggattcttggtagtactttaatgtgc
cgaacttgttcatctcagatttctttggagtttcagttttttcatactctgcctctttct
cctttactccatcacggtggttacaacattatgtctggatgcactttggagcattgcttg
aagaagtttcttaacactgagaaagttgaaaactacttctgctatagatgctggcatggt
gctgcactgaaatatttatctgtgataggagcagctgagacggaaatcgaaaagctcagg
agctgtggcggagaggaccaatgtgactgtaaaacttctcttcatcttcaaagaatgcct
tggtcaaatagctattcccatatattgaaacagttaatcatcgcccgtttcccaaagctc
ctatgcattcaagtgcaacgcgcttcgtttaacatgtttgaggaattcaaactgtcggga
catatcgcatttccacttgtcttgaacctctccttgttcacaccatcttcaataggcgta
aacatagaagaaaggattgagatgtcgtcagagtaccaaaagccagaagcatcaaaaaat
cacggcatgtacaggcttgtaacagtagtggagcattttggtagaaccggaagcgggcat
tatactgtatacagaagtgtgagagtgttctcacaagaggaagaagaagaagattgtgat
gaggatttgagctggtttagtatatctgattcagaagtttgcagagtttcagagagtgat
gttcttggtgctgaagctagcttgctcttctatgaaaggctttga
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