KEGG   Arabidopsis thaliana (thale cress): AT5G20000
Entry
AT5G20000         CDS       T00041                                 
Name
(RefSeq) AAA-type ATPase family protein
  KO
K03066  26S proteasome regulatory subunit T6
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03050  Proteasome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    AT5G20000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ath03051]
    AT5G20000
Proteasome [BR:ath03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     AT5G20000
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_5 AAA_16 AAA_2 nSTAND3 AAA_22 RuvB_N PRS7_OB TIP49 AAA_18 AAA_14 AAA_28 PhoH DUF4618 AAA_3 Mg_chelatase Parvo_NS1 AAA_33 AAA_11 ATPase AAA_17 AAA_19 AAA_24 RNA_helicase IstB_IS21 DUF815 AAA_25 AAA_7 DUF5906 DUF2072 TsaE bpMoxR Sigma54_activat NB-ARC Zeta_toxin RsgA_GTPase FapA
Other DBs
NCBI-GeneID: 832122
NCBI-ProteinID: NP_197500
TAIR: AT5G20000
UniProt: Q94BQ2 A0A178U901
LinkDB
Position
5:6756633..6759800
AA seq 419 aa
MAAVGVEARPPVTAMEETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQ
RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKL
TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS
RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN
KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKI
AEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggcggccgtaggagtggaggcgagacctcctgtgacagcgatggaggaaacctgcaac
gttaagggagcggcggcgaaacaaggagaagggcttaacaagtactacctccagcatctc
gatgagctccagcgcctgcaacgcgaaaagtcgtataaccttaatcgtcttgaagctcag
aggaatgaactcaattctcgagtacgaatgctcagagaagagttacagctccttcaagaa
cctgggtcctatgtgggtgaagtggtaaaagtgatgggaaaaaacaaggtcttggttaag
gttcatccagaggggaagtatgttgtcgatattgacaaaagtatagacataacgaaactc
actccatcaacgagagttgctctccgtaatgatagctatgttctccacctggttctgcca
agtaaagtagatcccttggttaaccttatgaaagttgagaaggttccagactccacatat
gacatgattggtggtcttgaccagcaaatcaaggaaataaaggaggtcattgaactgcca
atcaagcatcctgaattgtttgagtctcttggaattgcgcagccaaagggtgtgttgttg
tacggtccacctggaactgggaagacactattggctcgggctgtggcacatcacactgac
tgtactttcatcagagtttctggttctgagctggtccagaaatacattggagaaggttct
agaatggtcagagaactttttgtgatggcaagggagcatgcaccatcaatcatcttcatg
gatgaaatcgatagtatcgggtctgctcgtatggaatctggtagtggaaatggtgacagt
gaggtgcaaaggactatgcttgagcttctcaatcaacttgacggattcgaggcgtcaaac
aaaatcaaggttttgatggctacaaatcgtattgatattctggatcaagctcttctccgg
cctggaaggattgataggaaaattgaatttcctaatcctaatgaagagtcacgttttgat
atcttgaagatacactcaaggaaaatgaatttgatgcgtggaatcgatctgaaaaagatt
gcagagaagatgaatggtgcttcaggtgctgagctgaaggctgtatgcacggaggcgggc
atgtttgcacttcgtgagaggagagtacatgtgactcaggaagactttgagatggctgtg
gcgaaggtaatgaagaaagacacagagaagaacatgtctctgcgtaagctctggaagtag

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