Arabidopsis thaliana (thale cress): AT5G56140
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Entry
AT5G56140 CDS
T00041
Name
(RefSeq) RNA-binding KH domain-containing protein
KO
K14945
protein quaking
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT5G56140
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
AT5G56140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STAR_dimer
Qua1
KH_1
KRR1-like_KH2
Motif
Other DBs
NCBI-GeneID:
835713
NCBI-ProteinID:
NP_200425
TAIR:
AT5G56140
UniProt:
Q9FKT4
A0A178U898
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All DBs
Position
5:22725238..22728473
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AA seq
315 aa
AA seq
DB search
MMMMSSLGGGGGGGGGSGGGIGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFV
EQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLAS
GGIFQNARADMNGWASQFPSERSVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNF
NFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVE
AELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVS
PYNSLGMKRAKTREG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgtcgtcgcttggtggtggtggtggtggaggaggaggaagtggtggtggt
attggtggtggcggcggagggaggtttatgacgtattcgtcgtctctttcggtgcctcct
tctgctcctcagtctcctaattactccggtggtctccgatcacagtcttctgtcttcgtt
gagcaagagaagtatctttcagagttacttgcagagcgtcataagcttactccattcctg
cctgtgcttccacatgcatttcggctactaaaccaagaaattttgcgtgtaaccacactg
ttggagaatgctacagttttaagtcagagtgggcttgaccaccctagccctctggcttct
ggagggatatttcagaatgcaagagctgacatgaatggatgggcctcccagtttccatca
gaaagatctgttccatcatctccgggaccaaattggcttaactcacctggtagttcgtcc
ggtctcatcgccaagcgtacaatcagggtcgatattccagtcgacaattatccgaatttc
aattttgttggtcgcctcctgggtcctagaggaaactccctgaagcgagttgaagcaagt
actgattgccgtgttcttataagaggaagaggaagtataaaagatccaattaaggaggaa
atgatgagaggaaaaccgggatacgagcacctaaatgaaccacttcatatcttagtggaa
gcagaattaccgattgaaatagtcgatgcacggctcatgcaagctcgggaaatacttgac
gatcttcttactcctatggaggaaacccatgatatgtacaagaaacaacagctgcgcgag
ctagcattgctcaatggaactcttcgtgaagaaggatctccaatgtccggttctgtttct
ccttacaatagccttggtatgaagagagccaaaacaagagaagggtaa
DBGET
integrated database retrieval system
