KEGG   Amycolatopsis thermalba: L1857_03855
Entry
L1857_03855       CDS       T08681                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
athm  Amycolatopsis thermalba
Pathway
athm03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:athm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    L1857_03855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:athm03400]
    L1857_03855
DNA repair and recombination proteins [BR:athm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     L1857_03855
SSDB
Motif
Pfam: Ku Rho_N MIP-T3_C
Other DBs
NCBI-ProteinID: UQS22017
LinkDB
Position
complement(773549..774544)
AA seq 331 aa
MARAIWSGAINFGLVTVPVELYSATEDHTVHFRQFERGTSDRIRYKRVNERTGEEVAYEN
IVKGYDLGDGDYVLVEQDELDQIAPGRSRSIDIESFVDLGDIDPLYFQKSYWLAPTKEEF
GRAYGLLLQAMAETNKAGIARFVMRGKEYMAAVRAGDGVLVLDTLLFAEDVRDPAKELKK
LPEKAAPRGRELEMAIALVDSMADEWRPEAYHDQYTERVLKLIDDKKAGRTVSVEEEPSE
PTKVVDLFEALSRSVERRKSGAPSTKGGSGSGASAKKPSRKAEPDLSELSKAELDQMARE
LDIKGRSKLKRAELETAVREARPGKSRKRAS
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcgcgagcgatctggagcggtgcgatcaacttcggcctggtcacggtgccggtcgag
ctgtactccgcgaccgaggaccacaccgtgcacttccggcagttcgagcggggcacgtcg
gaccggatccggtacaagcgcgtgaacgagcggaccggcgaggaggtggcctacgagaac
atcgtgaagggctacgacctcggcgacggcgactacgtgctggtcgagcaggacgagctg
gaccagatcgcgcccggccggtcgcggtcgatcgacatcgagtcgttcgtggacctcggt
gacatcgacccgttgtacttccagaagagctactggctggcgccgacgaaggaggagttc
gggcgcgcctacgggctgctgctgcaggccatggcggagacgaacaaggccggcatcgcg
cggttcgtgatgcggggcaaggagtacatggcggcggtgcgcgccggggacggtgtgctg
gtgctggacacgttgctgttcgccgaggacgtgcgggacccggcgaaggagctgaagaag
ctgccggagaaggcggcgccgcgggggcgcgaactggagatggcgatcgcgctggtggac
tcgatggcggacgagtggcggccggaggcgtaccacgaccagtacaccgagcgggtgctg
aagctgatcgacgacaagaaggccgggcgcacggtgagcgtcgaggaggagccttcggag
ccgaccaaggtggtcgacctgttcgaagccctgtcccgcagcgtcgagcgccgcaagagc
ggcgcaccgtccacgaagggcggttcggggtccggggcgtcggcgaagaagccctcccgc
aaggcggagccggacctgtcggagctgagcaaggcggagctggaccagatggcccgagag
ctggacatcaagggccggtcgaaactcaagcgagccgaactggaaacagcagtgcgcgag
gcccggccggggaagtctcgcaagcgcgcctcctga

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