Amycolatopsis thermalba: L1857_03855
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Entry
L1857_03855 CDS
T08681
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
athm
Amycolatopsis thermalba
Pathway
athm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
L1857_03855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
athm03400
]
L1857_03855
DNA repair and recombination proteins [BR:
athm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
L1857_03855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
UQS22017
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All DBs
Position
complement(773549..774544)
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AA seq
331 aa
AA seq
DB search
MARAIWSGAINFGLVTVPVELYSATEDHTVHFRQFERGTSDRIRYKRVNERTGEEVAYEN
IVKGYDLGDGDYVLVEQDELDQIAPGRSRSIDIESFVDLGDIDPLYFQKSYWLAPTKEEF
GRAYGLLLQAMAETNKAGIARFVMRGKEYMAAVRAGDGVLVLDTLLFAEDVRDPAKELKK
LPEKAAPRGRELEMAIALVDSMADEWRPEAYHDQYTERVLKLIDDKKAGRTVSVEEEPSE
PTKVVDLFEALSRSVERRKSGAPSTKGGSGSGASAKKPSRKAEPDLSELSKAELDQMARE
LDIKGRSKLKRAELETAVREARPGKSRKRAS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcgatctggagcggtgcgatcaacttcggcctggtcacggtgccggtcgag
ctgtactccgcgaccgaggaccacaccgtgcacttccggcagttcgagcggggcacgtcg
gaccggatccggtacaagcgcgtgaacgagcggaccggcgaggaggtggcctacgagaac
atcgtgaagggctacgacctcggcgacggcgactacgtgctggtcgagcaggacgagctg
gaccagatcgcgcccggccggtcgcggtcgatcgacatcgagtcgttcgtggacctcggt
gacatcgacccgttgtacttccagaagagctactggctggcgccgacgaaggaggagttc
gggcgcgcctacgggctgctgctgcaggccatggcggagacgaacaaggccggcatcgcg
cggttcgtgatgcggggcaaggagtacatggcggcggtgcgcgccggggacggtgtgctg
gtgctggacacgttgctgttcgccgaggacgtgcgggacccggcgaaggagctgaagaag
ctgccggagaaggcggcgccgcgggggcgcgaactggagatggcgatcgcgctggtggac
tcgatggcggacgagtggcggccggaggcgtaccacgaccagtacaccgagcgggtgctg
aagctgatcgacgacaagaaggccgggcgcacggtgagcgtcgaggaggagccttcggag
ccgaccaaggtggtcgacctgttcgaagccctgtcccgcagcgtcgagcgccgcaagagc
ggcgcaccgtccacgaagggcggttcggggtccggggcgtcggcgaagaagccctcccgc
aaggcggagccggacctgtcggagctgagcaaggcggagctggaccagatggcccgagag
ctggacatcaagggccggtcgaaactcaagcgagccgaactggaaacagcagtgcgcgag
gcccggccggggaagtctcgcaagcgcgcctcctga
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