Actinomarinicola tropica: GH723_12545
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Entry
GH723_12545 CDS
T06914
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
atq
Actinomarinicola tropica
Pathway
atq00521
Streptomycin biosynthesis
atq00523
Polyketide sugar unit biosynthesis
atq00525
Acarbose and validamycin biosynthesis
atq00541
O-Antigen nucleotide sugar biosynthesis
atq01055
Biosynthesis of vancomycin group antibiotics
atq01100
Metabolic pathways
atq01110
Biosynthesis of secondary metabolites
atq01250
Biosynthesis of nucleotide sugars
Module
atq_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
atq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GH723_12545 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GH723_12545 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GH723_12545 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GH723_12545 (rfbB)
00525 Acarbose and validamycin biosynthesis
GH723_12545 (rfbB)
Enzymes [BR:
atq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GH723_12545 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
Sacchrp_dh_NADP
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QGG95860
UniProt:
A0A5Q2RPQ2
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All DBs
Position
complement(2549288..2550250)
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AA seq
320 aa
AA seq
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MKILVTGGAGFIGSNYVRWVFANTDDEVTVYDALTYAGNLSTLKDVDDSPRYRFVKGNIC
DPGTLEEAMAGHDAVVHFAAESHVDRSIAGPDDFVNTNCFGTNVVMDTARRLEIPRVVHI
GTDEVYGSVEEGSSKETDPLEPRSPYSASKAGSDLIALSYHHTHGLPVTVTRCTNNFGPY
QYPEKAIPLFTTNLLDGKPIPLYGDGLNERDWIHVDDHCAGVHLVLEQGAHGEIYNIGAG
NETPNRVLVDKILALLGVGEEMVTYVEDRLGHDRRYSVDIAKVSALGWRRQRTLDEALEQ
TVAWYRDNRWWWEPLKNAGS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgtcaccggcggcgccgggttcatcggctccaactacgtgcgctgggtg
ttcgccaacaccgacgacgaggtcaccgtctacgacgcgctgacctacgccggcaacctc
tcgaccctgaaggacgtcgacgactcccctcgctaccggttcgtcaagggcaacatctgc
gacccgggcaccctcgaggaggcgatggccggccacgacgccgtggtccacttcgcggcc
gagagccacgtcgaccgatcgatcgccggccccgacgacttcgtcaacacgaactgcttc
ggcaccaacgtggtgatggacacggcgcgccgcctcgagatcccccgggtggtccacatc
ggcaccgacgaggtctacgggtcggtggaggagggctcctcgaaggagaccgatccgctc
gagccccgctcgccgtactcggcgtcgaaggcgggctcggacctcatcgcgctctcgtac
caccacacccacgggctgccggtcaccgtcacccgctgcacgaacaacttcgggccctac
cagtaccccgagaaggccatcccgctgttcacgaccaacctgctcgacgggaagccgatc
cctctctacggcgacgggctcaacgagcgggactggatccacgtcgacgaccactgcgcc
ggcgtgcacctggtgctcgagcagggcgcgcacggcgagatctacaacatcggcgccggc
aacgagacgccgaaccgcgtgctcgtcgacaagatcctcgccctgctcggcgtgggcgag
gagatggtcacctacgtcgaggaccgcctcggccacgaccgccgctactcggtcgacatc
gccaaggtctccgcgctcgggtggcgccgccagcggaccctcgacgaggcgctcgagcag
accgtcgcctggtaccgcgacaaccgctggtggtgggagccgttgaagaacgccggctcg
tga
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