Amborella trichopoda: 18424382
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Entry
18424382 CDS
T02990
Name
(RefSeq) protein PAF1 homolog isoform X2
KO
K15174
RNA polymerase II-associated factor 1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18424382
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
18424382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
18424382
NCBI-ProteinID:
XP_006829032
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MASMYHNSGHGPGRTPTAIPPPAPFPHPQPSTFLPPPPQQPNPNPNFHLSNNNTVLPSPY
PQNPNPNFHHHAYTTSSHHYRNFPFSSNPPYTAPPPPPPPLPLSNPPPPPPPPPQPPPPP
PPPLQNSVHYPPPHYPQFFPSTHNSSMHNPPPSPPLPPPSSPPPPPPPASPPRPKIEAFQ
NPAPKPPAKEARPLPPPKPTGGARPPQLNDRGRVETEEERRARKKREYEKKKQEERHHHH
HHGHRSHQLGVGAKGHSGSGMMRGPERKGPFLGAERVENRLKKPTTFLCKLKFRNELPDP
TAQPKLLALNTDKDQYSKYTITSLEKLHKPKLFVEPDLGIPLDLLDISVYNTPSVRPRLA
PEDEELLRDGEVATPVKQDGIRRKDRPTEKGVSWLVKTQYISPLSLDQAKLSITEKQAKE
LRESREGRNHFLENLNNREKQIQAIEESFKASKLPPIHQTKPGLQPVEIMPLLPDFERYE
DRYVMISFDGDPVADLEAYNKLDRATHDELESRAIMKSFVSGTDSSKPEKFLAYLVPGPE
ELTKDMYDEHEDIDFSWIREYHWDVRGDDAEDPTTYLVNFEEGGARYLPLPTKLVLRRRR
IDGRSGHDIETHYPVPSRVTVRRRSTVATNELKESGRAPSMHDHSISKVAIPSKRGRSPV
EDVHDDRRKVSRLQDMDDDQFSGGEDMSD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatgtaccacaacagtgggcatggaccaggcagaacccctactgcaatccct
ccacctgctcctttcccccatcctcaaccctccaccttccttccccctcccccccaacaa
cctaaccctaaccctaatttccatctgagcaacaataacaccgtccttccttccccttac
ccccaaaaccctaaccctaatttccaccaccatgcatacacaacctcatcccaccactac
cgcaacttccccttctcctcgaacccaccatacaccgctcctcctcctcctccacctcct
cttcctctcagtaatcctccacctcccccaccgccacctcctcaaccccctcctccaccc
cctccgcctctccaaaactccgtgcactacccccctcctcattacccccaattcttcccc
tccacacacaactcgtctatgcacaaccccccaccctcgcctccgctgcctcccccttca
tcaccgccacctccgccaccccctgcatcccccccgcggcccaaaattgaggcgtttcaa
aaccctgctccaaagccccctgcaaaggaggcaaggcccctaccacccccgaaaccgact
ggtggagcccgccctcctcaattgaatgaccgggggagagtggagactgaagaggagagg
agggcaaggaagaagagagagtatgagaagaagaagcaagaagagaggcaccatcatcat
catcatggtcataggagtcatcaattgggggttggagctaaggggcattcaggttcaggg
atgatgaggggacctgagaggaagggcccatttttgggggctgaaagggttgagaatagg
ttgaagaagccgacaacctttttatgcaaattgaagtttaggaatgagcttccagatccc
actgcacaacctaagttattggctttgaacacagataaagatcaatactctaaatacact
atcacatcattagagaagctgcacaagccaaaactttttgttgagccagaccttgggata
cctcttgatctacttgacatcagtgtttacaacactcccagtgtacggccgcgtcttgcc
cctgaagacgaagagcttctccgtgatggtgaggtagctacccctgtcaaacaagatggc
attagaaggaaggatcgccctacagagaaaggtgtctcatggttggttaaaactcaatat
atatctcctctcagcctggatcaagcaaagctgtctatcactgaaaaacaagcaaaggaa
ctccgagaatcaagggaaggtcgcaatcatttcttggagaatctcaataatagagaaaaa
caaatccaggcaattgaagaatcgttcaaagcatcaaaactacctccaatacatcaaacc
aaacctggtctacaacctgttgaaatcatgccacttctacctgattttgagcggtatgag
gatcgttatgtcatgatatcctttgatggagatccagtagctgacttagaagcctacaac
aagttggatcgtgctactcatgatgaacttgaatcaagagctatcatgaagagttttgtt
tctgggacagattcatctaaaccggagaagtttttggcatatttggtccctggaccggaa
gagttgacgaaggatatgtatgatgaacatgaagatattgatttctcctggataagagag
taccactgggatgtccgtggagatgatgctgaagatcccactacatatcttgtcaatttc
gaggaaggaggagcaagatacttgcctcttccgacaaagctggttttacggaggaggagg
attgatgggagatctggtcatgacattgaaactcattatcctgtaccttcaagagtgact
gtgagacggaggtctactgttgccacaaatgaactaaaggaatctggaagagcgccttca
atgcatgatcattcgatttcaaaggttgctattccctcaaagcgaggaaggtctcctgtt
gaagacgttcatgatgacaggcgtaaagtttcacgcttgcaagacatggatgatgatcaa
ttcagtggaggggaagacatgtctgattga
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