Amborella trichopoda: 18431297
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Entry
18431297 CDS
T02990
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X1
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
atr
Amborella trichopoda
Pathway
atr00061
Fatty acid biosynthesis
atr00071
Fatty acid degradation
atr01100
Metabolic pathways
atr01212
Fatty acid metabolism
atr04146
Peroxisome
Module
atr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
18431297
00071 Fatty acid degradation
18431297
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
18431297
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
atr01004
]
18431297
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18431297
Enzymes [BR:
atr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
18431297
Lipid biosynthesis proteins [BR:
atr01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
18431297
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of breast milk
18431297
Exosomal proteins of breast cancer cells
18431297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18431297
NCBI-ProteinID:
XP_006841485
UniProt:
W1P871
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MKEFAVIVEDGKEGKDGKPAVGPVYRNLLSKDGFPPPIPDMNTSWDVFRSSVEKYPSNKM
LGWREFHGGKAGKYIWKTYKEIYDEVLLVGAALWASGARPGSCVGIYGVNCPQWIVAMAA
CSGHSFICVPLYDTLGPDAVDFIVEHAEIDYVFIQDKKLTEILKHDKKYSRRLKLLVCFT
TLTKQQRQNAASYEIAAYSWDEFLQMGKEHPTELSPPRPLDVCTLMYTSGTSGEPKGVVL
THESLVMYIAGLDIFMEQFEDKMTVDDVYLSFLPLAHILDRMMEEYFFHKGASVGFWQGD
IEALKDDLMELKPTYFTGVPRVFERVYESATKAIEEVGPLRKKIFNLLYKHKLGWMKSGY
KHSEASPFADLIAFRKVKARLGGRVRLITSGSAPLSTEVEEFLRVASCAFVLQGYGLTET
CGLSAHCFPDEMSMMGTVGVPSVYTELRLEEVPEMGYYPLGETARGEICVRGKTLFSGYH
KNPDLTREAIRDGWFHTGDIGELQPSGILKIIDRKKNIFKLSQGEYIAVEYLEKTYCSAP
IIEDIWVYGNSFESMLVAVVVPHKESAEKWASLNGQKGSVTELCALQQLQNHILLELRSL
AEKNKLRKFEFIKAVFLDPLPFDIERDLVTPTLKKKRGQFLKHYKEEIDKLYLRLKEQRS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatttgctgttattgtggaggatgggaaggaggggaaggatgggaagccagct
gttggtccagtttaccgaaatttattatcaaaggatgggtttccaccacctattcctgat
atgaacacctcttgggatgttttcaggtcctcggttgagaagtatccttcaaataagatg
cttggatggcgtgaatttcatggtggaaaggcagggaaatatatttggaaaacctacaaa
gaaatctatgacgaggttctgcttgttggtgctgccttgtgggcaagtggtgccagaccg
ggttcctgtgttggaatatatggagtgaactgcccacagtggatagtagccatggcggct
tgcagtggccacagtttcatttgtgtcccactttatgatacacttggaccagatgctgtg
gatttcatcgttgaacatgcggagattgattatgtttttattcaggataagaaactaacg
gaaattttaaaacatgacaaaaagtattctagaaggctaaagttgctagtttgctttaca
accctgacaaagcagcaaagacaaaatgcggccagctatgaaattgcagcatattcctgg
gatgagtttcttcaaatgggtaaagaacatccaactgaactttcacctccgaggcctctt
gatgtatgcactctaatgtacacaagcggaacaagtggagaaccaaaaggtgttgttttg
actcatgagagtcttgtgatgtatatagctggacttgacattttcatggagcagtttgaa
gataagatgactgtagatgatgtatatttatctttccttccacttgctcacatccttgac
cgcatgatggaggaatactttttccataaaggtgcatctgttggcttctggcaaggggat
attgaagcgttgaaggatgatcttatggagttgaagccgacctacttcactggtgttcct
agggtgtttgaaagagtatatgaaagtgcaacaaaggcaatagaagaagttggtccactc
aggaagaagatctttaatttgctctataaacacaaacttggatggatgaaatcagggtat
aaacatagtgaagcatcacccttcgcagacttgattgcattcagaaaggtcaaggcaagg
ttaggaggtcgtgttcgcttgataacatcaggaagtgctcctttgagtacagaagtggag
gagttcttaagagttgcgagttgtgcttttgtgctccaaggctatggattgactgaaaca
tgtggattatcggcgcattgtttccctgacgagatgagcatgatggggactgtgggagtt
ccctctgtctatactgagctacgtcttgaggaagttcctgagatggggtattatcctcta
ggtgaaactgcacgtggagagatttgtgttagagggaagacactcttttcgggataccac
aaaaatcctgatcttacaagagaagccatcagagatggttggttccatacaggagatata
ggggagttgcagccaagtggtattttgaagattattgataggaagaaaaatatattcaaa
ctttctcaaggggagtatattgcagttgaatatctggagaaaacctactgctctgcacct
attattgaagatatttgggtttatggaaatagcttcgagtccatgttggttgcagtagtt
gtaccacataaagaaagtgctgaaaaatgggcatctctcaatggacaaaaggggtccgta
actgagctgtgtgcacttcagcaactgcaaaatcatattctccttgagcttagatcactt
gctgagaagaacaagctgagaaaatttgagtttatcaaggcggtcttcttggatcctctg
ccatttgatatagaaagggacctggtgacacctacactgaagaagaaaaggggccaattt
ctgaaacactacaaagaagagattgataagttgtacctgaggctgaaagagcaaaggtcc
tga
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