Amborella trichopoda: 18433046
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Entry
18433046 CDS
T02990
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
atr
Amborella trichopoda
Pathway
atr00040
Pentose and glucuronate interconversions
atr01100
Metabolic pathways
Module
atr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18433046
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
18433046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
18433046
NCBI-ProteinID:
XP_006843138
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MAAFLKAWESVCQSTNPPTMTIPAGKTFLLNPTTFRGPCKSPAINIQCVDGLSIQGSGTI
DGQGHAWWPIKSAQETHALSFDVCTNLKLRDLHIVNSQQRHIAIHNSNTVYIGGLHINSP
EDGPNSDGELENSFIATGDDCISIGDGTYDVNASKITCGPGHGISIGSLGKDGTRSTAEM
IHVKDSFFIGTKNGARIKTWQLGKDSDDDSDYDIAMNMRVPDISNPMYRYIRILADIFPQ
NTRHQSSTLRPSGIMLQTSAVKVSDVQFIGVHGTCKSEVAVSIACSESIACTNIVVNGLE
IRSSEPQVSITTYCLNAHGTAQ
NT seq
967 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattcttgaaagcatgggaaagtgtatgccaaagtacaaatccccccaccatg
actattccagcagggaaaacctttctccttaatccaactacttttagaggcccgtgcaag
tctcctgctatcaatatccagtgtgtggatggccttagcattcaaggaagtgggacaata
gatggtcaaggacatgcatggtggcccatcaagagtgctcaagagacccatgcattgagc
ttcgatgtgtgcaccaatctaaaactgagggatttgcacattgttaatagccagcaaaga
catatcgcaattcataattctaatactgtttacatagggggtctccatattaattctcca
gaagatggccccaactctgatggggaactcgagaacagttttattgccactggtgacgat
tgcatttccattggtgatggcacgtatgatgtaaatgcatccaaaatcacttgtggcccg
ggtcacggcatcagcatcggaagtctcggtaaagatgggactcgttcaactgcagaaatg
atacatgttaaggattctttctttattggaactaaaaatggggctcggattaagacatgg
cagttgggaaaagactctgatgatgatagtgattatgatattgctatgaatatgcgtgtc
ccagatatatcgaatcccatgtatagatatatccgaatcttagcagatatatttcctcag
aatacaagacatcaatcctcaacattgcgaccctctggcataatgttgcaaacatcagct
gttaaggtgagcgatgtccaattcataggggtgcatggaacatgtaagagtgaggtggcc
gtctcaatagcatgcagtgagagcattgcgtgcacaaacatagtggtaaatggccttgaa
ataagatctagtgagccccaagtttctatcaccacatattgcctcaatgctcatggaact
gctcagg
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