Amborella trichopoda: 18444821
Help
Entry
18444821 CDS
T02990
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g03800
Organism
atr
Amborella trichopoda
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR
PPR_2
DYW_deaminase
PPR_1
PPR_3
E_motif
Eplus_motif
TPR_7
Motif
Other DBs
NCBI-GeneID:
18444821
NCBI-ProteinID:
XP_011627291
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MAAILSSLSHFKKHHPLSLTSPLLSTHHLQVAVGFKSSKVYLPSLQSQPPLQFLKQTQFL
NHNEEYDDEEKEDEDEEEKEDDKEKENDGNGDDEGGGGGGGGDGNVVSDQFTNCYCRALQ
NSISLREIRKGKELHGFIIKTSANSNILLSNNLITMYLKLGRFSDADKLFYCLPSPNLVS
WTAMITGYAKSGQELKALSLFFKMRFSGLEPNQFGFVGVLIACSKILGLELGKQIHGLTL
KMGFFSHVYVCNALIDFYVKCGSIVSAQLVFDKMGCRDLVSWNTVISGLAQGSKATCAFR
CFRDMMEDGFLADQFSLSTLLMASTKVYSRERGKQVHAYALRAGFESSLSVNNALIGFYT
KFGSIKEAANVFEKMGKRDVISWTGMLSGYSQHGLIDMAMHLFKKMPEKNLISYNALVAG
LAQNCRGYQALKLFIEMVENGMELSGFTLTSVANACAMESAVEGCKQIHGFVMKSGFLGS
SSCIGGALTDMYAKCGQMDDAQNLFDRLEHRDSIPWTSIMTGYARNGQPEKALSLFSKLY
DDEDDDERDKERGDDDGEGDIERECGSSIDEIAFATILGVCGTLGFHEMGKQLHSLVIRN
GFSSDRGVANAILTMYGKCDNLKDARKLFNLIPQHNLVSWNAFILLYVLHRLGGQALTIF
REMEMGTKPDGLTFISLFSACKYLTSNSVKTCLSLFESMKTKYNITPTDEHYASVVDVLG
HYNCFKEAEEFVKNMPIKPNAAVWRAFLAASKLHGDIERERYATKSLLKLEPQEPAASIL
LTNLHSASGRWHCSEKMREKMREHGLKKYPARSWIVYQNQVHSFYARDRSHPQAYDIYSG
LEILILECKKVGYVPDTSFVLHEVEEYQKEHFLLFHSSKMAVTFGLLMTDFGKPVRVVKN
IRLCGDCHEFMKIVSTVTGREISLRDTTGFHFFKGGVCSCGDCL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggccgccatcttgtcttctctctcgcacttcaaaaagcatcaccccctctctctcacg
tcacctctgctctctacccatcacctccaagtagccgttggattcaaatcttcaaaagtc
tatctcccttccttgcaatctcagccacctctccaatttctcaagcaaacccaattcctc
aatcacaatgaagaatatgacgatgaagaaaaagaagatgaggatgaagaagaaaaagaa
gacgacaaagaaaaagaaaatgatggaaatggtgatgatgaaggaggtggaggtggcggt
ggcggtgatggtaatgtggtttctgatcagttcacaaattgttattgcagagctctgcaa
aattcaattagtctcagagaaattcgaaagggaaaagagctccatggcttcataattaag
acctccgcaaattcaaacattctcctttccaataatctgataaccatgtatctaaagttg
ggccgcttttctgatgccgataagcttttttattgcctaccctctccaaatcttgtctca
tggacggcaatgatcactggctatgccaagtctgggcaagaattgaaggctctgagcctc
tttttcaaaatgagattctcaggtcttgaacccaaccagtttggtttcgtgggtgtttta
atagcttgtagcaaaattttgggcttagaattggggaaacagatccatggactaactctg
aaaatgggcttcttctcccatgtctacgtatgtaatgcattaatagatttttatgttaaa
tgtgggtcaatagtgagcgcgcaactagtgtttgataaaatgggttgtagagatttggtc
tcttggaacactgtgatttctgggttagcacaagggtctaaggccacatgtgctttcagg
tgttttcgagatatgatggaagatgggtttttagctgatcaattttctctctctaccttg
ctcatggcttcaaccaaggtgtattctagagagagagggaagcaggtccatgcttatgct
ctcagagctggttttgaatccagtctcagtgttaataatgctttaattgggttttacacc
aagtttgggagcatcaaggaggctgcaaatgtctttgagaagatgggcaagagagatgtt
atctcttggactggaatgctgagcgggtattctcaacacggtttgatagatatggctatg
catctgtttaagaagatgcctgagaagaatttaatttcttataatgctttagtagctggt
cttgcacaaaattgcaggggctatcaagctctgaagctattcatagaaatggtagaaaat
gggatggaattgtctggtttcactttgacaagtgttgcaaatgcttgtgcaatggaatca
gcagtggaagggtgcaaacaaattcatggttttgtaatgaagtctggttttttgggttct
tcttcttgcattggaggtgcattaactgatatgtatgccaagtgtgggcaaatggatgat
gctcaaaatctctttgatcggttagaacatcgagattcaatcccttggacttcaattatg
acagggtatgcaaggaatggccagccggagaaggccttgtcgctcttcagcaagttatat
gatgatgaagatgatgacgagagggataaagaaagaggagatgacgatggagagggagat
atagagagagagtgtggctcttccatagatgaaattgcttttgccaccatcttgggtgtt
tgtgggacattaggttttcacgaaatgggaaagcaactgcactctctagttattaggaac
ggtttctcttctgatagaggagttgccaatgcaattctcaccatgtatggcaaatgtgat
aatttgaaagacgcaaggaagctcttcaacctcatacctcaacacaatcttgtgtcttgg
aatgcatttatattgctttatgttcttcatagacttggaggccaggccctaactattttt
agagagatggagatgggtacaaagccagatggacttacctttatctctctattctctgcc
tgcaaatatctcacctcaaactctgtaaaaacctgtttaagcctctttgaatccatgaaa
accaaatacaacatcaccccaactgatgagcattatgcatcagtggtggatgttttaggc
cactataattgcttcaaagaagctgaagaatttgtcaagaatatgccaataaagccaaat
gcggcagtttggcgagccttccttgctgcttccaagctccacggcgatatagagagagaa
agatatgcaacgaaatccctccttaagcttgagcctcaagaacctgcagcttctatactg
ttaacaaacctccattcggcttctgggaggtggcattgctctgagaagatgagagagaag
atgagagagcatgggctaaagaagtatccagcaaggagctggatagtttatcagaatcaa
gtgcattctttctatgctcgagatagatcacacccacaagcctatgatatttacagtggc
ttggagattctgatcctagagtgcaaaaaagtgggatatgtacccgatactagctttgtt
ctccatgaagtagaggagtatcaaaaggagcacttcttgttattccatagctccaaaatg
gcagttacctttgggctcttaatgactgattttgggaagcctgtgagggttgtgaaaaat
ataagactatgtggagattgccatgaattcatgaagattgtgtccactgtaactgggaga
gagatttctttgagagataccactggcttccatttcttcaagggaggtgtatgctcctgt
ggagattgcttgtga
DBGET
integrated database retrieval system
