Amborella trichopoda: 18445920
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Entry
18445920 CDS
T02990
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
atr
Amborella trichopoda
Pathway
atr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
18445920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18445920
04121 Ubiquitin system [BR:
atr04121
]
18445920
03029 Mitochondrial biogenesis [BR:
atr03029
]
18445920
Membrane trafficking [BR:
atr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
18445920
Atg8 conjugation proteins
18445920
Ubiquitin system [BR:
atr04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
18445920
Mitochondrial biogenesis [BR:
atr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
18445920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
18445920
NCBI-ProteinID:
XP_006856108
UniProt:
U5D5T8
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MAESTVLQFSPFQSHVEEGFWKRLSSLKLNTLGLDETPVKITGFYGPCSHAQVSSHLYLL
DESLPANLAEESSSSEMVLGNRNRCPIPGTLYNTNTLESFRGLDKQSLIRKEAKKIWEEI
CSGRVEAACAVLSRFLVISYADLKKWTFHYWFAFPALVLNPSALVSKLQPASEWFNLEEG
KSLSEACNEWRKSSLTAAVPFFLVIITADSHVTLRPLKDWETCQRDGHKLLFGFYDPCHL
PSNPGWPLRNFLAFICSRCKIEKIQFLCYRERHGLADLTHSLVGEALVSISQEWKNPQFI
PEAVGWERNGSKLAPRRIDLATSMDPIRLAMSAADLNLKLMRWRALPSLNLDKLSATKCL
LLGAGTLGCQVARMLMAWGIKKITLVDNGRVSMSNPLRQSLYTLEDCLNGGDWKADAAVR
SLKSIFPGVEAEGFTFAIPMPGHPVQAKETAGVLEDCRRLQNLISSHDVIFLLTDTRESR
WLPTLLCTNANKLAITAALGFDSYVVMRHGAGVSADDKDASFSVCSSGIEGHESRRLGCY
FCNDVVAPNDSTSNRTLDQQCTVTRPGLAPIASALAVELMIGILHHPEGMNAPGEMASSI
SESSSQPLGILPHQIRGSLSQFSQMVLVGSSFNRCTACSNLVVSEYRRRELEFVIQALNH
PNYLEDLTGLTELMDKARSFNLDWEEDDETDIETVL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcaactgtactgcaattttctccttttcaaagccacgtcgaagaaggattt
tggaagagattgtcatctctcaaactgaatactcttggtctggatgaaacccctgttaaa
atcacaggtttttatggaccatgttctcatgctcaagtttcaagccatttgtatctactc
gatgaatccctaccagcaaatttagcggaagagtcctcatcatcagaaatggttctaggg
aataggaatcgctgtcctatacctgggaccctctataacacaaatacactggagagcttc
cgtggccttgataagcaaagcttgataagaaaagaagcaaagaagatatgggaggagatt
tgttctggaagagtggaagcagcctgtgcagtactttctaggtttctggtgatctcatat
gctgatttgaagaagtggacatttcattactggtttgcattccctgctttagttctcaat
ccttccgccttagtcagcaagttgcaaccagcttcagaatggttcaatctagaagaggga
aaatctctgtctgaagcatgcaatgagtggcgcaagtcaagcttaactgcagcagtacca
ttctttttggttattataaccgccgattcacatgtcactctcaggccattgaaagattgg
gaaacttgccagcgtgatggacataagttgttatttggtttttatgacccatgccatctt
ccaagcaaccctggttggcctcttcgcaatttccttgcctttatctgttcaagatgcaag
attgaaaagattcaatttttatgctatcgagagagacatggtttagcagatttgacacac
tcccttgttggtgaagctttggtttcaatctcacaagagtggaagaatcctcaatttatt
cctgaggcagtgggttgggagagaaatggatcaaagttggcaccaagacgcattgatctt
gctacttccatggacccgattaggttagccatgtctgcagcagatttgaatttgaaactc
atgagatggagagctttgccatctctgaacttagacaaactctcagctaccaagtgtctt
ctcttgggagctggtaccctaggatgccaagtagcacgcatgcttatggcttggggtatc
aaaaaaatcacgctggttgataatggacgagtttctatgtcgaatccattgaggcagtct
ctttatactttggaggattgcctcaatggtggtgattggaaggctgatgcagcagtgaga
agcctaaagagtatatttcctggtgtggaggcagaaggtttcacttttgccatcccaatg
ccagggcatcctgtgcaagccaaagagacagccggtgtgcttgaggattgtagacgcctt
caaaatctgatttcttcccatgatgttatatttcttttgaccgataccagagagagtcgt
tggcttccaacacttctgtgtacaaatgctaacaagcttgccatcactgctgcactggga
tttgacagctatgttgtcatgcgccatggggctggtgtatcggcagacgataaagatgct
tcattttctgtctgctcttctgggattgagggtcatgaaagcaggcgacttggctgttac
ttttgcaatgatgttgttgctccaaatgactcgacttcaaaccgcacattagatcagcaa
tgcactgtaacccgaccagggcttgctcccatcgcttctgctcttgcggtggaactcatg
ataggaatcttacaccatccagaggggatgaatgctccaggagagatggcgagttccatt
tcagaaagtagttctcaaccacttggtattttgccccatcaaatacgaggctctctttct
cagttttcccagatggtacttgttggaagctcattcaatcgatgtacagcgtgctccaac
ttagtggtgtcagagtacaggagaagggaactggagtttgtcatccaagcgttaaaccac
cctaattatctcgaggatctcacaggcttaactgagttgatggataaggcaaggtctttc
aatttggactgggaggaggatgatgagaccgacatcgagacggtgctgtag
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