Acidithiobacillus thiooxidans: GCD22_01068
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Entry
GCD22_01068 CDS
T06281
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03030
DNA replication
atx03430
Mismatch repair
atx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCD22_01068 (holB)
03430 Mismatch repair
GCD22_01068 (holB)
03440 Homologous recombination
GCD22_01068 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atx03032
]
GCD22_01068 (holB)
03400 DNA repair and recombination proteins [BR:
atx03400
]
GCD22_01068 (holB)
Enzymes [BR:
atx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCD22_01068 (holB)
DNA replication proteins [BR:
atx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCD22_01068 (holB)
DNA repair and recombination proteins [BR:
atx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCD22_01068 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Rv0078B
QueC
Motif
Other DBs
NCBI-ProteinID:
QFX95486
UniProt:
A0A5P9XQP7
LinkDB
All DBs
Position
992384..993385
Genome browser
AA seq
333 aa
AA seq
DB search
MKTFQPDPQSWKPIQALLASGLPQAMLAVGDSGSLLRLHLDALQAATLCFKPTDEGFACE
QCRSCKLLAEGSHPDLWVAAPEPGKQIAIDTLRLAMEWIQYTPQVSNSRWLRIDNAEAMT
VAAANAILKTLEEPPTRAHVVLHSEQASRLLPTIRSRLQRIPLPEMQMVQSMHWLQQQGV
DAENSGALLRQLGNRPLRALELWEAGWLEQRQQWMRSLLDLSEQGVVATLKLAEQWSKSS
DLFLIREMVLNVLADFMRLRQGLLDRIADLDYLEELRLKAPDISAEALQSNLDGWLQLPL
TLSQNSNGMMVMEKLLLDWLKLWPRRKTHGIQN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtttcagccagatccccaatcctggaaacccatccaggccttattggcctcc
ggattaccgcaggccatgctggcagtcggtgattccggttctctgctgcgtctgcatctc
gatgcgctgcaggccgccacgttgtgtttcaagccgactgacgaagggtttgcctgtgaa
caatgccgttcgtgcaaactgctggcggaaggctcccatccggatttatgggtagcagcc
cctgagccgggtaagcagatagccattgataccttgcgtctggccatggaatggattcag
tacacgccgcaggtcagcaactcgcgctggttgcgcatagataatgccgaagccatgacg
gtggcagccgccaacgccattctaaagaccctggaagaaccccccacccgtgcgcacgtt
gttttgcatagtgaacaggcttcccgtctgttgcctaccattcgctcccgcctgcagcgc
attcccctgccggaaatgcagatggtgcagtccatgcactggctgcaacagcagggagtg
gatgcagaaaatagcggcgctttgctccgtcaattaggcaatcggcccttgcgcgccctg
gagctttgggaggccggttggctggagcagcgccagcaatggatgcgcagtttgctggat
ttgtcagagcagggggttgtggcgaccctgaaacttgcggagcaatggagcaaaagttcg
gatctatttctgatccgggagatggtactgaatgtcctcgccgattttatgcgtttgcga
caggggctgctggacagaatcgctgacctggactatctagaagagttgcgactgaaagct
ccggatatttcggcggaagcgctgcagtccaacctggatggctggttgcaactgccattg
accctgtcccaaaacagtaacgggatgatggtcatggaaaagttgcttttggactggctg
aaattgtggccaaggaggaaaacccatggaattcaaaactga
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