Aerococcus sp. Group 1: HMPREF9243_1131
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Entry
HMPREF9243_1131 CDS
T01447
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF9243_1131 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aur03019
]
HMPREF9243_1131 (recQ)
03400 DNA repair and recombination proteins [BR:
aur03400
]
HMPREF9243_1131 (recQ)
Enzymes [BR:
aur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF9243_1131 (recQ)
Messenger RNA biogenesis [BR:
aur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF9243_1131 (recQ)
DNA repair and recombination proteins [BR:
aur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF9243_1131 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
Pro-kuma_activ
DNA_pol_lambd_f
HHH
DsrD
DUF6809
Motif
Other DBs
NCBI-ProteinID:
AEA01129
UniProt:
F2I4Z8
LinkDB
All DBs
Position
complement(1162015..1163805)
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AA seq
596 aa
AA seq
DB search
MLIEHALEKYFGYKTFRPGQKELIESILAGRDSLGILPTGGGKSICYQLPALILPGITLV
ISPLISLMKDQVDSLNEHGIHSVYLNSSQSSEDYFAVLDRIHSGQVKLIYVSPERLKSES
FLQLANDLPLDQIAIDEAHCVSQWGHDFRASYREIANFIDQLSHRPVVSAFTATATNRVQ
QDIIHQLALENPYVLINSFDRPNLTFEVMEPESKKKTVIDLIDKEEAAIIYASSRKTVDR
LSEWLRDQGLPVSAYHAGMSPADRMASQNDFIYERTNIIVATNAFGMGIDKPDVRQVIHY
NLPTNLESYYQEAGRAGRDGLPARAILLYSPKDILTAKFLISQSNDPTSEGRLNDMINYA
TTSSCLRQHILAYFGQEAPDHCQNCSNCLQQVKKVDVSREGQMILSCIVRMAYPYGMTLV
TDVLKGKKLQKIKDKHFDQLSTYALLKDMNEQTIKNIISQLISEGALAVNEYKGLSLTEK
ALPILKGNKCLYIKESAYIRSENKTKTSQKAQSLTDHLSPEDEELFEALRELRYSLASEE
NVPAYIIFNNQSLLDMVEIKPKNYQEFLDISGVGPVKADKYADDFCQLIEDFVSIK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgctaattgagcatgctttggaaaaatattttggctataaaacgtttcgccccggacaa
aaggaactcattgagagtattctagctggtcgcgatagtttggggattttacccactggc
ggaggcaaatcaatttgctatcaattacctgctttaatcttacctggtattactttagta
atctctcctttaatctcattaatgaaggaccaagtagatagtcttaatgaacacggaatt
catagtgtctatctcaactccagtcaatccagtgaggattattttgctgtcctggatagg
atccattctggacaagtcaagctgatttatgtatcaccagaaaggttaaagagcgagtct
tttctacaattagctaatgacttacccttagatcaaatagctattgatgaagcccactgt
gtttcccaatggggacacgactttagagcctcttaccgagagattgctaactttattgac
cagttaagtcatcgaccggttgtgagtgcctttacagccacagctaccaatcgggttcaa
caggatattattcatcaattggctcttgagaatccctatgtcctcattaattcctttgat
cgtcccaatctgacttttgaggttatggaaccagaatcaaagaagaagactgtaattgat
ttaatagataaagaagaagcagctatcatttatgcttcttctcgaaaaactgttgaccgt
ttgagtgaatggttaagagaccaaggacttccggtgagcgcttatcatgcgggaatgagc
ccagcggatcgtatggcttcgcaaaatgacttcatctatgagcgtactaatattattgtg
gcaaccaatgcctttgggatgggaattgataaacctgatgttcggcaggtgatccattac
aacttgcccactaatttagagagttactaccaagaagcaggccgggcaggcagagacggc
ttgccggctagagccattcttctctacagccccaaggatatcttgaccgcaaaattttta
attagtcaaagcaatgatcccactagtgaaggtcgtttaaatgatatgattaattatgca
acgacctcttcctgcttgagacaacacattttagcctacttcggtcaggaagctcctgac
cattgccaaaattgctccaattgtttgcagcaagtgaaaaaggttgatgtcagccgagaa
ggacaaatgatcctctcttgtattgttagaatggcttatccttatggcatgaccctagtc
acagatgtcttaaaagggaaaaaacttcaaaaaattaaagacaaacattttgaccaatta
tcaacctacgctttgttaaaagatatgaatgagcaaaccattaagaatattatttctcaa
ttaatttctgaaggggccttggcggttaatgaatataagggacttagccttacggaaaag
gcgctcccaattctaaaaggaaataagtgcctttatattaaagaatctgcctatattcga
tcagaaaataaaacgaagactagtcagaaagctcaatcactgactgatcatttatcgcca
gaagatgaagaattatttgaagcacttcgtgaattacgctatagtttagctagtgaagaa
aatgttcctgcctatattatctttaataaccagagtctccttgatatggtggaaataaag
cctaagaactatcaggaatttcttgatattagcggagtaggcccagtaaaggcagataaa
tatgcagatgacttctgtcagttaattgaagattttgtaagtattaaataa
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