Trichormus variabilis: Ava_2960
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Entry
Ava_2960 CDS
T00277
Name
(GenBank) Binding-protein-dependent transport systems inner membrane component
KO
K05846
osmoprotectant transport system permease protein
Organism
ava
Trichormus variabilis
Pathway
ava02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_2960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_2960
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
Ava_2960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
EspB
Motif
Other DBs
NCBI-ProteinID:
ABA22571
CyanoBase:
Ava_2960
UniProt:
Q3M8W5
LinkDB
All DBs
Position
complement(3668163..3668795)
Genome browser
AA seq
210 aa
AA seq
DB search
MKDFFLIKYAPEILQRTIEHLFLVGIAISIAIIIGIPLGILITRQKQLRQPILGIANILQ
TIPSLALFGLLIPVPVIGGIGATPAIVALALYSLLPLIRNTYTGISGVDPAIREAGRGMG
MTDRQLLLQVEIPLAMAVILAGVRVATVISIGIATIAAAIGAGGLGVFIFRGIAVVNDQL
ILAGAVPAAVIALLADLLIGLLEQKFKVNS
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttcttcttaattaagtatgctccagaaatcctacaacgcacgatagagcat
ttatttttagtaggtattgctattagtattgccattattattggcattcctttaggaatt
ttaatcacgcgccaaaaacaactgcggcaaccgattttaggtatagctaatattctccaa
actatacccagtttagcattgtttggcttactcatccccgttcctgtaattggtggtatt
ggtgcgactccagcaattgttgccctggctttatattctcttttgccactaattcgtaat
acttatacaggcatctctggagtagatccggcgattcgagaagctgggcggggaatgggt
atgactgatagacaattgttattacaggtagaaattcccttagcgatggcagttattttg
gctggggtgcgagtagcgacagttatctctattggaattgccactattgcagctgccatt
ggtgctggtggtttgggagtctttatttttagaggaattgccgtagtcaatgatcaatta
attttagctggggcagttcctgcggcggtaattgctttattggctgatttattaattgga
ttgttagagcaaaaattcaaggttaattcgtaa
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