KEGG   Agrobacterium vitis VAR03-1: RvVAR031_pl05540
Entry
RvVAR031_pl05540  CDS       T08810                                 
Symbol
trbD
Name
(GenBank) conjugal transfer protein TrbD
  KO
K20529  type IV secretion system protein TrbD
Organism
avf  Agrobacterium vitis VAR03-1
Pathway
avf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:avf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RvVAR031_pl05540 (trbD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avf02044]
    RvVAR031_pl05540 (trbD)
Secretion system [BR:avf02044]
 Type IV secretion system
  Trb secretion system protein
   RvVAR031_pl05540 (trbD)
SSDB
Motif
Pfam: VirB3 FA_desaturase
Other DBs
NCBI-ProteinID: BCH57223
UniProt: A0A6S6N0L1
LinkDB
Position
pRvVAR031b:5622..5921
AA seq 99 aa
MAEAGSSLARSRVHRALSRPNLLMGADRELVLLTALAAIILIFVVLTWYAALFGIAFWLV
AVAALRMMAKSDPLMRRVYLRHISYKTSYRATSSPWRKF
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctgaggcaggatcttctctggcgcgctcgcgtgtgcacagggcattatcgcgtccg
aacctgttgatgggtgctgaccgcgagctcgtgcttctgacggcgctggccgctatcatc
ctgatcttcgtcgtcttgacctggtacgcggcactgttcggcatcgcgttctggctggtc
gcagtcgcggcactccgcatgatggccaaatccgatccacttatgcgccgggtctatctg
cgccacatctcctacaagacgtcctatcgcgcgacgtcgtcgccgtggcgcaagttctga

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