Allorhizobium ampelinum: Avi_3538
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Entry
Avi_3538 CDS
T00851
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avi03021
]
Avi_3538 (rpoH)
Transcription machinery [BR:
avi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Avi_3538 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r3
DUF3431
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ACM37543
UniProt:
B9JRD2
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Position
1:2931954..2932856
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AA seq
300 aa
AA seq
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MARNSLPSITAGEGGLNRYLDEIRKFPMLEPQVEYMLAKRYAEHGDRDAAHRLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGKIQAIEEGDLKPDQVTEIATKLKVSEEEVISMNRRL
SGDASLNAPIRASEGESGQWQDWLVDDHDSQEDTLIEQDELETRRNMLSRAMGVLNDRER
RIFAARRLAEEPVTLEELSSEFDISRERVRQIEVRAFEKVQDAVQKDALEQAKALRVVES
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagcttgccttcgattaccgccggtgaaggcggactgaaccgatacctg
gatgagatccgcaagttcccaatgctggaaccccaggtggaatatatgctggccaagcgc
tatgccgagcatggcgaccgcgatgccgcgcaccggcttgtcaccagccatttgcgtctc
gtggcgaagattgccatgggttatcgcggctacggcctgccgattggcgaagtcgtctct
gagggcaatgtcggcctgatgcaggctgtcaaaaaattcgatcccgaacgcggcttccgg
cttgctacctatgcaatgtggtggatcaaggcctcgattcaggaatatatcctgcgctcc
tggtcgctggtgaaaatgggcacgaccgccaaccagaagcggctgttcttcaacctgcgc
cgcctgaagggcaagatccaggccatcgaggaaggcgacctgaagccggaccaagtcacg
gagatcgccaccaagctgaaggtcagcgaggaggaagtgatttccatgaaccgccgcctg
tcgggcgatgcctcgctgaacgcgccgatccgcgccagcgaaggtgaatccggccagtgg
caggattggctggtggacgatcatgacagccaggaagacacgctgatcgagcaagatgag
ctggaaacccggcgcaacatgctgtcgcgcgccatgggcgtgctgaacgaccgcgaacgc
cgcatcttcgccgcccgccgcctggccgaagagccggtgacgctggaagaactgtcatcc
gagttcgacatcagccgcgaacgtgtgcgccagatcgaagtgcgcgcttttgaaaaggtt
caggatgctgtccagaaggacgcactggaacaggccaaggcgttgcgcgtcgtcgagtcc
tga
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