KEGG   Archangium violaceum: JQX13_26540
Entry
JQX13_26540       CDS       T07137                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
avm  Archangium violaceum
Brite
KEGG Orthology (KO) [BR:avm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avm02044]
    JQX13_26540 (tssC)
Secretion system [BR:avm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JQX13_26540 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QRK13275
LinkDB
Position
complement(6188291..6189775)
AA seq 494 aa
MSTQTQTQNPAGAAAAVSPSLLDEILSEAKIKPKDEGYDVARRGVEAFITEMLAPNRSEE
RVDKALVDAMIAEIDRRLTSQVNEIMHHQDVQKLESAWRSLKFLVDRVDFRENIRVEMLN
VSKEDLLKDFEDSPEVVKSGLYRLVYSNEYGVFGGKPYGLLLGNYDFGPGPQDIDLLRKC
ASVAAMAHAPFIANASPEMFGEQNFLNLPNLKDLKSLFEGPQYARWHSFRESEDARYVGL
CMPRFLLRLPYGEKTIPVKAFNFNEDVVGHHDRYLWGHASTAFATRVADSFAKFRWSPNI
IGPQSGGAVEMLPLHQYEAMGEIQTKVPTEVMLTERREYELSEEGFIGLVFRKDADNAAF
FSANSAQKAKFFGSTPEGKAAETNYRLGTQLPYMFIMTRLAHYVKVLQREQIGSWKERSD
LERELNQWMSQYIADMDDPAPAVRSRRPLRAARVTVEDVEGQPGWYRCSLQVRPHFKYMG
ASFTLSLVGKLDKE
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgagcacccagacccagacccagaatccagcgggcgccgcggcggccgtttcgccctcc
ctgctcgacgagatcctctccgaggcgaagatcaagcccaaggacgagggctatgacgtc
gcccgccggggcgtggaagccttcatcaccgagatgctggcccccaaccgctccgaggag
cgcgtggacaaggccctcgtcgacgcgatgatcgcggagatcgaccggcgcctgacgtcc
caggtcaacgagatcatgcaccaccaggacgtccagaagctggagtccgcgtggcgctcg
ctgaagttcctcgtggaccgggtggacttccgcgagaacatccgcgtggagatgctcaac
gtctccaaggaggacctgctcaaggacttcgaggactcccccgaggtggtgaagagcggc
ctgtaccggctggtgtactccaacgagtacggcgtgttcggtggcaagccctacggcctg
ctgctgggcaactacgacttcggcccgggcccgcaggacatcgacctgctgcgcaagtgc
gcgtccgtggcggccatggcgcacgcgcccttcatcgccaacgccagcccggagatgttc
ggcgagcagaacttcctcaacctgccgaacctcaaggacctcaagtccctcttcgagggt
ccgcagtacgcccggtggcactcgttccgcgagagcgaggacgcgcgctacgtgggcctg
tgcatgccgcgcttcctgctgcgcctgccctacggtgagaagaccatccccgtgaaggcc
ttcaacttcaacgaggacgtggtcggccaccatgaccgctacctgtggggccacgcctcc
acggcgttcgccacccgcgtggcggactcgttcgccaagttccgctggagcccgaacatc
atcggcccgcagtccggtggcgcggtggagatgctgccgctgcaccagtacgaggccatg
ggggagatccagaccaaggtccccaccgaggtgatgctcaccgagcggcgcgagtacgag
ctgagcgaggagggcttcatcggcctggtgttccgcaaggacgcggacaacgcggccttc
ttctcggccaactcggcgcagaaggccaagttcttcggcagcacgccggagggtaaggcg
gcggagaccaactaccgcctcggtacgcagctgccctacatgttcatcatgacgcggctg
gcgcactacgtgaaggtgctccagcgcgagcagattggcagctggaaggagcgctcggac
ctggagcgcgagctcaaccagtggatgagccagtacatcgccgacatggacgacccggcg
cccgccgtgcgttcgcgccgcccgctgcgcgccgcccgcgtgacggttgaggatgtggag
ggtcagcccggctggtatcgttgcagcctgcaggtgcgcccgcacttcaagtacatgggc
gcgtccttcaccctgtcgttggtgggcaagctggacaaggagtga

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