Archangium violaceum: JQX13_42240
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Entry
JQX13_42240 CDS
T07137
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
avm
Archangium violaceum
Pathway
avm00860
Porphyrin metabolism
avm01100
Metabolic pathways
avm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JQX13_42240 (cobD)
Enzymes [BR:
avm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
JQX13_42240 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
QRK14057
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Position
9984574..9985527
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AA seq
317 aa
AA seq
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MLDGGTHAALVLGLALAVDLIWGEPPTPVHPVVWMGRLQRRLRRLAPRAPLPAFLHGLGM
AITGPVVFGLGSWALIHLVSPWPLLQIALEVYLLKSAFAVRALAEAGLAVFHALHKGDDP
AARLALRSLVSRDTSGLEPPLLAAAAVESVAENTSDSVVAPLLFFAVAGVPGALAYRAAN
TLDAMIGYRGELEWLGKAAARLDDVLNLVPARLSAALLVLACALCGASPARAVLSWWRDG
SATESPNAGRPMAAVAGGLGVELEKVGHYRLGTGGRQPRAEDIRRAVFLMVAASLLAAAL
TAAYVGGEGFRVALASP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgctggacggaggaacgcacgcggcgctggtgctggggctcgcgctcgcggtggacctc
atctggggcgagccgcccacgccggtgcaccccgtggtgtggatgggccgcctgcagcgg
cgcctgcgccggctggcaccccgtgcgccccttcccgcgttcctccatggactgggaatg
gcgatcaccggacccgtcgtcttcggactcggaagctgggcactgatccacctcgtctct
ccctggcctctcttgcagatcgctctggaggtgtacctcctcaagagcgccttcgcggtg
cgggccctggccgaggcgggactggccgtcttccacgccctgcacaagggggatgatccg
gcggcgcgcctggccctacgcagcctcgtgtcgcgcgacacctcgggcctcgagcccccg
ctgctggctgcggcggcggtggagtcggtggcggagaacacctcggactcggtggtggct
cccctgctcttcttcgcggtggcgggagttcccggtgcgctcgcctaccgggcggccaat
acgctggacgcgatgattggatatcgcggcgagctggagtggctgggcaaggccgccgcc
cggctggacgacgtgctcaacctggtgccggcgcgtctgtccgcggcgctcctcgtgctg
gcgtgcgcgctgtgtggtgcctctcccgcccgggcggtgctctcctggtggcgagacggc
tccgccaccgagagccccaacgccggccgtcccatggcggcggtggccgggggcctgggc
gtggagttggagaaggtggggcactaccggctgggaacgggaggacgccagccgcgagcg
gaggacatccgccgcgcggtcttcctcatggtcgcggcctcgctgctggccgctgcgttg
acggccgcctatgtcggcggggagggattccgtgttgcccttgcctcgccctga
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