Aeromonas veronii TH0426: AMS64_18750
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Entry
AMS64_18750 CDS
T04529
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
avo
Aeromonas veronii TH0426
Pathway
avo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMS64_18750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avo03019
]
AMS64_18750
03016 Transfer RNA biogenesis [BR:
avo03016
]
AMS64_18750
Enzymes [BR:
avo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AMS64_18750
Messenger RNA biogenesis [BR:
avo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AMS64_18750
Transfer RNA biogenesis [BR:
avo03016
]
Prokaryotic type
tRNA degradation factors
AMS64_18750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
CsrA
SLS1_KH2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AMQ44248
UniProt:
A0A142E7W0
LinkDB
All DBs
Position
complement(4107983..4110130)
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AA seq
715 aa
AA seq
DB search
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PAVSPDIVAMIGASAALAISGIPFGGPIGAARVGYMNGQYVLNPTTTELPQSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVYGHEQMQTVINAINEFAAAVGTKPWDWTPPAVNEA
LKAKVAELASAELGEAYRITEKAVRYETIAAIKGRVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVGTGILPRAHGSALFTRGETQAIVVATLGTERD
AQNIDELTGNRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSAAEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTEGVTALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRAQISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRISAVA
NEAAMEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADHLTIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAPAADAAPAAEEAPAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcactctggaaaccggt
gtgatggcccgtcaagccactgcggccgttatggtcagcatggacgatacctgcgtattt
gtgaccgtagtcggcaagaaagaggccgatcacggccgtgatttcttcccgctgaccgtc
aactaccaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggccgtccgagcgaaggcgagaccctcatctcccgtctgatcgaccgtcctattcgtccg
ctgttcccggaaggcttcctcaatgaggttcaggtcgttgcgaccgtaatgtccgtgaat
ccggccgtatcccccgacatcgttgccatgatcggtgcctctgccgcactggccatctcc
ggtatcccgtttggcggcccgatcggtgctgctcgcgtgggttacatgaacggtcagtat
gtgctgaacccgaccactaccgaactgccgcagagtgatctggatctggtggttgccggt
actgccaatgccgtgctgatggttgagtccgaagcggccatcctctctgaagaagtgatg
ctgggtgccgtggtatacggtcatgagcagatgcagaccgtgatcaatgcgatcaacgag
tttgccgctgccgtcggcaccaagccgtgggactggactccgcctgccgtcaacgaagcg
ctgaaagccaaggttgccgagctggcgagcgccgaactgggtgaagcctaccgcatcacc
gagaaggctgtccgttacgaaaccatcgcagccatcaagggtcgtgtggttgagcaagtt
atcgcttccggtgtggaagaagatgccaagaagatcggcgaagagttccacagcctagaa
agccgcatcgttcgtggtcgcgtagtacgtggtgagccgcgtatcgatggtcgcgatcct
gaaatgatccgcgctctgagcgtaggtaccggtattctgccccgtgcccacggttctgcc
ctgttcacccgtggtgaaactcaggccatcgtggtcgccactctggggaccgagcgtgat
gcccagaacatcgacgagctgaccggcaaccgtgccgatcgcttcatgctgcactacaac
ttcccgccatactgtgtcggtgagaccggcatgatgggtagcccgaagcgtcgtgaaatc
ggtcacggccgtctggccaagcgcggcgttgctgccgtgatgccgagcgccgccgagttc
ccgtacgtggtgcgcgtggtctctgaaattaccgaatccaacggttcctcctccatggcg
tctgtctgtggttcctctctggcgctgatggatgccggtgtgccgatcaaggcctccgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtcgtgctgtccgacatt
ctgggtgacgaagatcacctgggcgacatggacttcaaagtagccggtaccaccgaaggt
gtgaccgcgctgcagatggacatcaagatcgaaggcatcaccaaagagatcatggagatt
gctctgaagcaagctcgtggcgctcgtctgcacatcctgaaagtgatggacgaagctatc
caggctccccgtgcccagatctccgattttgcaccgcgtatccacaccatcaagatcaat
cctgagaagatcaaggacgtgatcggtaagggtggttccgtgatccgtgcgctgaccgaa
gagaccggcaccaacatcgagctggatgatgacggtactgtacgtatctccgccgtggcc
aacgaagccgccatggaagcgatccgtcgcatcgaggctatcaccgccgagatcgaagtg
aaccgcatctatgaaggtaaagttgttcgtctggccgatttcggtgcattcgtcaacatt
ctgccgggcaaagatggtctggtacacatctcccagatcaccgacgctcgcgtgcagaac
gtggctgaccacctgaccatcggtgacgtggtcaaggtgaaggtactggaagtggaccgt
cagggccgcgtacgtctctccatcaaggaagcgaacgccccgaccgaagcagctgcacct
gctgctgacgccgctccggccgctgaagaagcgcctgctgcagagtaa
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