Agrobacterium vaccinii: HRR99_11555
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Entry
HRR99_11555 CDS
T08171
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avq03009
]
HRR99_11555
Enzymes [BR:
avq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HRR99_11555
Ribosome biogenesis [BR:
avq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HRR99_11555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
UHS62111
LinkDB
All DBs
Position
circular:complement(2341053..2342075)
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AA seq
340 aa
AA seq
DB search
MNDPFKQGGDARKVLIAGEDAEGRLDAWLAAEVGGDLSRSRIKALIEQGAVFLNEKPITE
PKKKVHPGDRIEITMPEPEDPEPKGEDIPLEVEYEDEDLIVLLKPPGLVVHPGAGNWTGT
LVNALIHHCGDSLSGIGGVKRPGIVHRLDKETSGVMVVAKNDNAHRHLAAQFADHGRTGP
LERAYKAIVWGRPKTLRGTIDAPLGRGADRTKRAVKNEDSNDAREAITHYEVIERYHEKP
DATCLASLVECRLETGRTHQIRVHMAHIGHPLIGDPEYGAAFRTKANLLPDDARDVVNLF
PRQALHAYLLAFEHPRTGEVMEFETDMPDDMDALAVVLRA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacccctttaaacaaggcggagacgcaaggaaagtcctgattgccggggaagat
gccgaaggacgcctcgatgcatggctggcagccgaagtcggtggcgatctgtcgcgcagc
cgcatcaaggcgttgatcgagcagggcgcggtttttctgaatgagaagcctatcaccgag
ccgaagaagaaggtgcatccgggcgaccgcatcgagatcaccatgccggagccggaagac
ccggaacccaagggtgaggatattccgctcgaggtggaatatgaagacgaagacctcatc
gtgcttttgaagccgcctggcctcgtcgtgcatcccggtgccggtaactggaccggaacg
ctggtcaatgcgctgatccaccattgcggtgatagtctttccggcattggcggcgtcaag
cgccccggcatcgtgcaccgtctggacaaggaaaccagcggcgtgatggtggttgccaag
aacgacaatgcccaccggcatctggctgcgcaatttgccgaccacggtcgcacggggccg
ctagagcgcgcctataaagccatcgtctgggggcgtccgaaaaccttgcgcggcaccatc
gatgcgccgcttggccgcggtgccgaccgcaccaagcgtgcggtgaaaaacgaagactcc
aacgacgcgcgcgaggcgattacgcattacgaggtgatcgagcgctatcacgaaaagccg
gatgcgacgtgccttgcctcgctggtggaatgccggcttgaaacaggccgcacccatcag
atccgcgttcatatggcccatatcggccacccgctgatcggtgacccggaatatggcgcg
gccttccgaaccaaggccaaccttctgccggatgatgccagagatgtggtcaacctgttt
ccgcgccaggccctgcatgcctacttgctcgcattcgaacatccccgcaccggtgaggtg
atggagttcgagacggatatgcctgacgatatggatgccctggcggtcgttctgcgcgcc
tga
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