Acinetobacter wuhouensis: BEN71_01795
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Entry
BEN71_01795 CDS
T05823
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
awu
Acinetobacter wuhouensis
Pathway
awu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
awu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BEN71_01795 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
awu03021
]
BEN71_01795 (rpoC)
03400 DNA repair and recombination proteins [BR:
awu03400
]
BEN71_01795 (rpoC)
Enzymes [BR:
awu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BEN71_01795 (rpoC)
Transcription machinery [BR:
awu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BEN71_01795 (rpoC)
DNA repair and recombination proteins [BR:
awu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BEN71_01795 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AXQ20902
UniProt:
A0A385C1Z7
LinkDB
All DBs
Position
235793..239986
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPMEKYQLLNDEEYFTALEEHGDE
FSAKMGAEAVQDLLKDIDLEAEISRLREEIPNTTSETKLKKASKRLKLMEAFKESNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPSLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAINAKGEGMVFADTHEVNR
ALATGQVDLHARVKARVHQTVIDENGNREQQTIVVDTTPGRCLLWEVVPEGMDFQQINVE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPQKQAIIE
KAEVEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSFTTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTFDGLVMTPFIQGGDVIENL
GARVLGRVLAEDAKKPGSDDVILPRNTLIDEKLANYLEEQGVDEVKVRSVVNCASTFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDIGRERERYKLPYGASILIKDGEAVEGGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDMR
PAIVLDTADGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVGENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHELVND
FSEVDQAFSQALNEDSF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgcaaaaagacggactcagacggtcatgctccagta
gagtttgatcgcatccgtattggtcttgcgtcaccagaaatgattaagtcatggtctcac
ggtgaagttaaaaagccagaaaccattaactaccgtacgtttaaacctgaacgtgatggt
ttattctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgcg
aaagttcgtcgtgaacgtatgggtcacatcgaattggcttctccagttgcgcatatttgg
ttcttgaaatcattaccaagccgtattggtttactccttgatatgactttacgtgatatc
gaacgtgtattgtatttcgaatcttatgtggttacagaccctggcatgacgccaatggag
aaataccaacttcttaacgatgaagaatacttcactgctttagaagaacatggtgatgaa
ttcagcgcgaaaatgggtgcagaagctgttcaagacttgttgaaagacatcgatcttgaa
gctgaaatttctcgtttacgtgaagaaattccaaatacaacttcagaaacgaagcttaaa
aaagcatctaaacgtttgaagttgatggaagcgttcaaagagtcgaacaacaaaccagaa
tggatggtgatgaatgtacttcctgtacttccaccagatcttcgtccgttagttccgctc
gaaggtggtcgttttgcgacttctgacttgaacgatctttaccgtcgtgtgatcaaccgt
aacaaccgtttaaaacgtcttcttgaccttgcggctccagatattatcgtacgtaacgaa
aaacgtatgttacaagaatctgtagatgcattgcttgataacggtcgtcgtggtcgtgca
attaccggttcgaacaaacgtccgcttaaatctttggcagatatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttacttggtaagcgtgttgactattctggacgttcggtaatt
actgtaggtccatcattacgtttacatcaatgtggtcttccgaagaaaatggctcttgaa
ttattcaaaccatttatctttgcgaaattacaagcatctggtcaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgcgaaacgccagaagtttgggacgttctagcatctgta
attcgccaacatccagtgatgttgaaccgtgcaccaacacttcaccgtttaggtcttcaa
gcatttgaacctattctaattgaaggtaaagcgattcgtcttcacccactcgtttgtgct
gcgttcaacgccgacttcgatggtgaccaaatggcggttcacgtaccattaacactagaa
gctcagttagaagctcgtgcgttaatgatgtcgaccaacaacatcttgtcacctgcgaat
ggtgagccaatcatcgttccttctcaggacgttgtcttgggcttgtattacatcacacgt
gatgcaatcaatgccaaaggtgaaggcatggtgttcgcggatactcacgaagtaaaccgt
gcattggcaacaggtcaagttgatttacacgctcgcgttaaagcacgtgtacaccaaact
gtaattgatgaaaatggtaaccgtgagcaacaaaccattgttgtagatacaactccaggt
cgttgcttactttgggaagttgttcctgaaggtatggatttccaacaaatcaacgttgag
atgactaaaaagaacatctctaaattgattaactcttgctaccgtaaattaggtttgaaa
gataccgttatctttgctgaccaattgatgtacttgggcttccgtcaagcaacacgttca
ggtgtttctgttggtatggaagacatgttgattccaccacaaaaacaagcaattatcgaa
aaagctgaagttgaagttcgtgaaatcgaacaacaatttgaacaaggtttcgtaactgca
ggtgagcgttataacaaagttgtcgatatttgggcgcgtacaaacgaccaagtagcgaaa
gcgatgatggataacttgtcattcacaactgttaaaaacaaacagggtgaagacgagaaa
caaaaatcattcaactcaatctacatgatgtctgactctggtgcccgtggttcggcagct
cagattcgtcagcttgcaggtatgcgtggtttgatggcgaaaccagatggttcgatcatt
gaaacaccaattaaagcaaacttccgtgaaggtttgaccgtacttcagtacttcatttca
acacatggtgcgcgtaaaggtttggccgatacagcacttaaaactgcgaactctggttac
ttgactcgtcgtcttgttgacgtagcgcaagatttggttattactgagccagattgtggt
acttttgacggtcttgttatgacaccgttcattcaaggtggcgatgtaatcgagaactta
ggtgctcgagtattaggtcgtgtacttgctgaagatgcgaaaaaacctggttcagatgat
gttattcttccacgtaacacactcatcgacgaaaaacttgcgaactatttagaagagcaa
ggtgtcgatgaagtgaaagtacgttcagttgtaaactgtgcgtctactttcggtgtatgt
gcgaaatgttatggtcgtgacttggctcgtggtcacttggtgaatccaggtgaatctgtc
ggtgtaatggctgcacaatcaattggtgaacctggtacacagttaaccatgcgtacattc
cacgtgggtggtgctgcaagccgaacttctgctgctaatagcgttcaagttcgtaacaaa
ggtacagttcgtttccataacgttaaaactgtacaacatgctaaaggtcacttggtatct
gtttcacgttctggtgaaatcggtattgcagatgacatcggtcgtgaacgtgaacgttat
aaacttccatacggtgcgtctatcttaatcaaagatggcgaagctgtagaaggcggcggt
attgttgcaacttgggatccgcatacacatccattggttacagaagttgctggtaaagca
cgtttcagccaaatcgctgatggcgtaactgcaacatcgaagactgatgatgctactggt
atgacgactgtagaaatcttacctgtaacagcacgtcctgcgtctggtaaagatatgcgt
cctgcaatcgtgttggatacagcagatggcggtgagcaattctacttcttgccacaaaat
acgatcgtaactgttcgtgatggtgaaacaatcggtgtcggtgacgttatcggtcgtgta
ccacaagaatcttcacgtactcgtgatattaccggtggtttaccacgtgtagctgactta
ttcgaagcgcgtaaaccgaaggaacatgcaattcttgcagaagtttctggtgttgttagt
tttggtaaagaaactaaaggtaaaaaccgtttggtgatcacgcctgatgatggttctgag
atttacgaagaattgattccaaaatggcgtcaaatcaacgtgttcgaaggtgagcatgtg
aaccgtggtgaaaccatttctgatggtccacaaaacccacatgacatcttacgtctgaaa
ggtgaagttgcattaactaactacatcgtgaacgaagttcaagacgtttaccgtctccaa
ggtgtaaaaatcaacgataaacacattgaagtcatcgtacgtcaaatgttgcgtaaagtt
gatatcactgatggcggtgatacaagcttcatcaaaggcgaacaagtggattacatccgc
gttgtgggcgaaaaccaagctgtcttggctcaaaacaagttccctgcgaagtttgaacgt
caattgatgggtatcacgaaagcatcgctttctactgactcgttcatctctgctgcatcg
ttccaggaaacaacacgtgtgttaactgaagctgctgtaacaggtaaagaagatgattta
cgtggtttgaaagaaaacgttgtagtaggtcgcttgatcccagcaggtactggtcttgca
taccacttagaacgtcgtcgtcaagaagcggaagctgctgagcatgaattggtgaatgac
ttctctgaagttgaccaagcattctctcaagctttaaatgaagattctttctaa
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integrated database retrieval system
