Amphibacillus xylanus: AXY_01500
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Entry
AXY_01500 CDS
T02266
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
axl
Amphibacillus xylanus
Pathway
axl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
axl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXY_01500 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axl03021
]
AXY_01500 (rpoA)
03400 DNA repair and recombination proteins [BR:
axl03400
]
AXY_01500 (rpoA)
Enzymes [BR:
axl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXY_01500 (rpoA)
Transcription machinery [BR:
axl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXY_01500 (rpoA)
DNA repair and recombination proteins [BR:
axl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXY_01500 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAM46282
UniProt:
K0IZ76
LinkDB
All DBs
Position
151758..152702
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVHINDDSTFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITSVQIDG
VLHEFSTIDGVVEDVTTIILNLKKLALNIYSEDVKTLEIDVQGEGVVTAADITYDSDVEI
LNPDLHIATLASNGALRMKMTAEVGRGYRPAELNNHDDLPIGVIPVDSIFTPVSRATFQV
ENTRVGQITNFDKLTLDVWTDGSIRPEEAVSLGAKILTEHLNLFVGLTDEAQHAEIMIEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEDDMMKVRNLGRKSLEEVK
NKLAELDLSLRTED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccgaaaattgaaactgtacacatcaatgatgactctacgttt
ggaaagtttgtcgtagaaccgcttgagcgtggatatggtacgactcttggaaattccctg
cgtcgtattcttctgtcctccttaccaggtgctgcgataacatctgtacagattgacgga
gtcctacatgagttttcaacaattgatggtgtagttgaagatgttacaactattattctt
aatcttaagaaactagcgttaaacatttattcagaagatgttaaaacgctagaaattgat
gtgcaaggtgaaggtgtggtaacagctgctgacatcacttatgatagtgacgttgagatt
ctgaatccagatcttcacattgcaacattagcatctaacggggcacttcgcatgaaaatg
actgcagaggttggtcgtggttatcgtccagctgagcttaataatcatgacgatttaccg
attggtgtgatcccagttgactcgatttttactccagtctcacgtgcaacgttccaagtt
gaaaatacacgtgttggtcaaatcactaactttgataaattaacattagatgtgtggact
gacggaagcattcgcccagaagaagcagtttctttaggtgcgaagattctgacagagcac
ttaaatctatttgtaggtttaactgatgaagcacaacatgctgaaatcatgatcgaaaaa
gaagaagaccaaaaagaaaaagtactagagatgacaatcgaagagttagatttatctgta
cgttcatataactgtttgaagcgcgcgggaattaacaccgtacaagagcttacaacaaaa
acagaagatgatatgatgaaagttcgtaacttaggacgtaaatcacttgaagaagtgaag
aacaaattagctgaattagacttaagcttacgaactgaagattag
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