Aster yellows witches'-broom phytoplasma AYWB: AYWB_470
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Entry
AYWB_470 CDS
T00314
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYWB_470 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ayw03019
]
AYWB_470 (pnp)
03016 Transfer RNA biogenesis [BR:
ayw03016
]
AYWB_470 (pnp)
Enzymes [BR:
ayw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AYWB_470 (pnp)
Messenger RNA biogenesis [BR:
ayw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AYWB_470 (pnp)
Transfer RNA biogenesis [BR:
ayw03016
]
Prokaryotic type
tRNA degradation factors
AYWB_470 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
PI3K_p85B
DUF4619
Motif
Other DBs
NCBI-ProteinID:
ABC65587
UniProt:
Q2NJ06
LinkDB
All DBs
Position
complement(490475..492622)
Genome browser
AA seq
715 aa
AA seq
DB search
MLKKVFETTNLKDSFQVEIGTYARNVDSSILVRYQDTVVLTTMVFSRKPNNLDFLPLTVI
YQEKLYAAGKIPGSFLRREGRSNDHEILTSRLIDRSLRPLFPDYFQQEVQVINTVLSLDP
DFKSELASMLGSSLSLLISEIPFFEAISGVYVGKINNEFIINPTLQQLANSTLHLIVAGT
KHNVTMIEAHANEVSEQDFLEAINFAHQYIKKLCLFQENIKQQFAPVKMTKTLHQTEQIQ
QQSFFAKNHSQVKQAILSCNSKNDLQQLKEQILDQAKQTPFFKTIDAITVFDYEAHKKHL
QITENLFQKLSKQEMRSLILQEKIRPDKRELEEIRTLESQIDLLPRAHGSALFTRGKTQS
LAAVTLGCLSESKIIDGLSDEQNKRFMLHYNFPPFSVGAVGRYTAPSRREIGHGTLAEKA
ISQVLPEEKDFPYTIRVVSEILESNGSSSQATVCSSSLALMASGVPLKKAVAGISVGLVF
DQETNKYVILSDIQGLEDHVGDMDLKIAGTNKGITALQMDLKIQGIPFKILQEAFLQAKK
GRLHILEQMNQTISQPRLEVSKYAPKVCMMQIKPEKIRDIIGSGGKIINQIIESHDGVKI
DIEQDGRVFVMHSNLETVKKTVAFIESLIQEIQVGTCYQASILRFLSDKQGKMIGAVAQV
CPGIEGLIHVNKMKFQKITDVLKIGETVLVKCTKINERGRIDFLLLPKKTQEKNS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaaaaagtttttgaaactactaatttaaaagattcttttcaagttgaaatagga
acttacgccagaaacgttgattcttctattttagtgcgctaccaagatacagtggttctt
acaactatggtttttagtcgtaaacccaataatcttgattttttacctcttactgttatt
tatcaagaaaaattatacgctgctggaaaaattcctggcagttttttacgccgcgaaggg
cgttccaacgaccacgaaatcctcacttcacgcctcattgaccgttcattacgcccatta
ttccctgattattttcaacaagaagttcaagtaattaatacagttttaagcttagaccct
gattttaaaagcgaacttgcctctatgcttggaagctctctttctttattgatttctgaa
atacccttttttgaagccatttctggagtttatgtaggaaaaatcaacaatgaatttatc
atcaatcccactttgcaacaacttgccaattctactctacatttgattgttgcaggcacc
aaacacaacgttactatgatagaagcacacgccaatgaagttagcgaacaagacttttta
gaagccattaattttgcacaccaatacattaaaaaactgtgcttatttcaagaaaatatc
aagcaacaatttgcacctgtcaaaatgacaaaaaccttgcatcaaactgaacaaattcaa
caacaatccttttttgctaaaaaccattcccaagttaaacaagctattttaagttgcaat
agcaaaaatgatttacaacaattaaaagaacaaatcctagaccaagccaaacaaactcct
tttttcaaaactattgacgctattactgtttttgattacgaagcccacaaaaaacattta
caaataacagaaaacttatttcaaaaattatccaaacaagaaatgcgttctttaatttta
caagaaaaaatacgaccagataaaagagaattagaagaaataagaaccctcgaatcccaa
attgatttgttgccccgcgctcatggttctgctttgtttaccagaggaaaaactcaaagc
cttgctgcagtgaccttgggctgtttatcagaaagcaaaattattgacggtctaagtgac
gaacaaaataaacgttttatgcttcattataactttcctcctttttcagttggtgcagtt
ggtcgttatactgctcctagcagacgagaaatcggacacggcactcttgccgaaaaagcc
atatctcaagttttgcccgaagaaaaagattttccctacactattagagtagtttctgaa
attctagaatctaacggttcttcttctcaagccactgtttgctcttcttctttggcatta
atggcatcaggggttcctttaaaaaaagccgttgcaggaatttcagtaggattagttttt
gaccaagaaaccaataaatacgttattttaagtgatatccaaggtttagaagaccacgtt
ggagacatggatttaaaaatagcaggtaccaacaaaggaattactgctttacaaatggat
cttaaaatccaagggatcccttttaaaattttgcaagaagcttttttacaagccaaaaaa
ggacgccttcatattttagaacaaatgaaccaaacaatttctcaacctcgtttagaagtt
tcaaagtacgcccctaaagtttgtatgatgcaaataaaaccagaaaaaattcgtgatatt
atcggaagtggtggcaaaatcatcaatcaaattattgaatctcatgatggtgtaaaaatt
gatattgaacaagacggacgcgtttttgtaatgcattccaacttagaaacagttaaaaaa
acagtcgcttttattgaaagtttaatccaagaaattcaagtaggcacttgctatcaagcc
tctattttacgttttttaagtgataaacaaggaaaaatgattggagctgtggcacaagtt
tgtccaggaatcgaagggcttatccacgttaataaaatgaaatttcaaaaaatcaccgat
gttttaaaaataggtgaaacagttttggttaaatgcaccaaaatcaacgaacgcggaaga
attgattttttgcttttgcccaaaaaaacacaagaaaaaaactcttag
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