Nitrogeniibacter mangrovi: G3580_04210
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Entry
G3580_04210 CDS
T06549
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
azq
Nitrogeniibacter mangrovi
Brite
KEGG Orthology (KO) [BR:
azq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azq03016
]
G3580_04210
Enzymes [BR:
azq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
G3580_04210
Transfer RNA biogenesis [BR:
azq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G3580_04210
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HEPN_AbiU2
AbfS_sensor
Motif
Other DBs
NCBI-ProteinID:
QID16910
UniProt:
A0A6C1B3K5
LinkDB
All DBs
Position
complement(919265..921157)
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AA seq
630 aa
AA seq
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MFVLFEESGAFKCGTVLVDNDASLQVENTHGKRLKLKRSHVMLQFDSPAAGELLPRAEAE
SESLDIDFLWEVCGDDEFGFAEFAAEYFGHTPSTVEATAVLLRLHSAPIYFHRKGRGRFR
KAPPDILQAALAGLEKKRQQAEAIDRMRDELLAHRLPAEFEGMVPQLLYRPDRNRLETKA
LEAACVDSGLSAANLMLACGALQSSYDFHYGRFLFDFFPDGEAFPEVTVPTPPDDLPIAP
VRAFSIDDATTTEIDDAFSVTPRAGGGWTVGIHIAAPGLGLERGSALDAIARQRLSTVYM
PGNKITMLPDSVVEAFTLQAGRTCPAVSLYLELNADLSVAQQYSRLERIPVEANLRHHDL
EPVFNEHTLVNGGPDYPWKQELTLLWELATIMEAGRGKPATNQTQTDYSFYVDWDVTTAD
GPGAASITPRLRGAPLDKLVAELMIVANSTWGKRLDEAGIPGIYRVQGGGKVRMATAAAP
HEGLGVDCYAWSSSPLRRYVDLVNQWQLISVLREDEPVFPPKSPELMEVVRDFDVAYSAY
AEFQRHMERYWCIRALRWRDDARVTARVLRENVVRIDDMPFVFKVGGMPLQVPGAHVALE
IKDSDLLDVDLRARFVSVLSEPTLDEAASE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgttatttgaagagagcggtgcgttcaagtgcggcaccgttctggtggacaac
gacgcctcgctgcaagtggagaacacccacggcaagcgtctgaagctcaagcgcagccac
gtgatgctccagttcgacagccccgcggcgggcgagctgctgccccgcgccgaggccgag
tcggagtccctggacatcgattttctgtgggaagtgtgcggtgacgatgagttcggcttt
gccgagttcgccgccgagtacttcggccatacccccagcacggtcgaagccacggcggtg
ctgctgcgcctgcattcggcgccgatctatttccaccgcaaggggcgcgggcgtttccgc
aaggcgccgccggacattctccaggccgccctggccgggctggagaagaagcgccagcag
gccgaggccatcgaccgcatgcgcgacgagctgctcgcgcaccggctgccggccgagttc
gagggcatggtcccgcagctgctctatcggccggaccgcaaccgcctcgagaccaaggcg
ctggaggcggcgtgcgtggacagcggcctgagcgccgccaacctgatgctcgcctgcggg
gcgctgcagtcgagttacgacttccactacggccgcttcctgttcgatttcttccccgac
ggcgaagcctttcccgaggtgacggtgccgacgccgccggacgatctgccgatcgccccg
gtgcgcgccttctccatcgacgacgccaccaccaccgagatcgacgacgccttttcggtg
accccgcgggccggtggcggctggaccgtgggcatccacatcgccgcaccgggtctcggc
ctcgaacgcggctcggccctcgatgccatcgcccgccagcgcctgtccacggtctacatg
cccggcaacaagatcaccatgctgcccgacagcgtggtcgaggccttcaccctccaggcg
gggcggacctgcccggcggtgtccctgtatctggagctgaacgcggacctgtcggtggcg
cagcagtactcccggctcgaacgcattccggtcgaggccaacctgcgccaccacgatctg
gaaccggtcttcaacgagcacaccctggtcaacggtggccccgactacccgtggaagcag
gagctgaccctgctgtgggagttggccaccatcatggaggccgggcgcggcaagccggcc
accaatcagacccagaccgactacagcttctatgtggactgggacgtgaccaccgccgac
ggccccggcgcggcgagcatcacgccacgcctgcgcggcgccccgctggacaagctggtg
gccgaactgatgatcgtggccaactccacctggggcaagcgcctcgacgaggccggcatt
cccggcatctaccgggtgcagggtggcggcaaggtgcgcatggccaccgccgcggcaccg
catgagggcctcggggtggactgctatgcctggtcgagctcgccgctgcgccgctatgtg
gacctggtcaaccagtggcagctcatcagcgtgctgcgggaggacgaaccggtgttcccg
cccaagtcgccggaactgatggaagtggtgcgcgacttcgacgtagcctacagcgcctat
gccgaattccagcgccacatggaacgctactggtgcatccgcgcgctgcgctggcgcgac
gacgcccgggtcacggcccgggtactgcgcgagaacgtcgttcgcatcgacgacatgccc
ttcgtgttcaaggtcggcggcatgcccctgcaggtgcccggcgcccatgtggcactcgag
atcaaggacagcgacctgctcgacgtagacctgcgcgcgcgcttcgtctcggtgctctcc
gaacccaccctcgacgaggccgcttctgagtag
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