Azoarcus sp. DD4: CJ010_04430
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Entry
CJ010_04430 CDS
T06048
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
azr
Azoarcus sp. DD4
Brite
KEGG Orthology (KO) [BR:
azr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azr03016
]
CJ010_04430
Enzymes [BR:
azr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CJ010_04430
Transfer RNA biogenesis [BR:
azr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CJ010_04430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
SUFU
Motif
Other DBs
NCBI-ProteinID:
QDF95847
UniProt:
A0A4Y6KNK1
LinkDB
All DBs
Position
complement(934134..936035)
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AA seq
633 aa
AA seq
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MFVLFEEDGAFKAGTILAENDASLQVENTHGKRVKIKRANVLLNFREPSPADLLARAEAA
AEALDTEFLWEVCGDDEFGFAEFAAEYHGHPPSAVEAATVLLRLHSAPIWFHRKGRGRFR
KAPADILQAALAGLEKKRQQALAIEEMRAELVEGRMPAAFAGLLPQILYRPDRNRLEVKA
LEAACVDSGLSAPRLLLKCGALASSFEYHFNRFLFEYFPEGIAFPTFERPAVPTDLPRAD
VAAFSIDDATTTEIDDAFSVTPKPGGGWRVGIHIAAPALGCERGSALDEIARRRLSTVYM
PGNKITMLPDEMVEAFTLAAGRDCPAISLYLDVNANLAVTGQESRIELVPIVANLRHHDI
EPVFNEETVHEGVPDFKWKRELMLLWDLATVLEAGRGKPAANQNQVDHSFYVDWQTETGD
GPGYVTITKRLRGSPMDKLVAELMILANSTWGKLLDEAGVPGLYRVQSGGKVRMTTVAGP
HEGLGVDCYAWSSSPLRRYVDLVNQWQIIAVLQGTPPAFAPKSAELMAALRDFELTYAAY
ADFQRQMERYWCLRWLRQAAAGPVEATVLRDNVVKLEAIPLVFKVPSMPLQLPGSRVRLV
VEGSDLLDVEIQARFQEILSEPDPEDYVEFEGP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgctgttcgaagaggacggagccttcaaggccggaaccatcctcgctgaaaac
gatgcctccctgcaggtcgaaaacacccacggcaaacgggtgaagatcaagcgcgccaac
gtgctgctgaacttccgcgagccctccccggccgacctgctcgcacgcgccgaagccgca
gccgaggcgctcgacaccgaattcctgtgggaagtctgcggcgacgacgaattcggcttc
gccgagttcgccgccgaataccacggccacccaccgagcgccgtcgaggccgcaacggtg
ctgctgcgcctgcactcggcgccgatctggttccaccgcaaggggcgcgggcgcttccgc
aaggcgccggccgacatcctgcaggcggcgctcgccggtctggaaaagaagcgccagcag
gcgctggccatcgaggagatgcgcgccgaactggtcgaaggccgcatgcccgccgccttc
gccggcctgctgccgcagatcctctaccggcccgaccgcaaccggctggaagtgaaggcg
ctcgaagccgcctgcgtcgacagcggcctgtcggcaccgcgcctgctgctgaaatgcggc
gcgctggcgtccagcttcgaataccacttcaaccgtttcctgttcgaatacttcccggaa
ggcatcgccttcccgaccttcgaacggcccgcggtgccgaccgacctgccgcgcgccgac
gtggctgccttctccatcgacgacgccaccaccaccgagatcgacgacgccttctcggtg
accccgaagcccggcggcggctggcgggtcggcatccacatcgcggcgccggcgctgggc
tgcgaacgcggctcggcgctggacgagatcgcgcgccgccgcctgtccaccgtctacatg
ccgggcaacaagatcacgatgctgccggacgaaatggtcgaggccttcaccctggccgca
ggccgcgactgcccggcgatctcgctctacctcgacgtcaatgccaacctcgccgtcacc
ggccaggaaagccgcatcgaactggtgcccatcgtcgccaacctgcgccaccacgacatc
gagccggtgttcaacgaggagacggtgcacgagggcgtgcccgatttcaaatggaagcgc
gagctgatgctgctgtgggatctggccacggtgctggaagccggacgcggcaaaccggcg
gccaaccagaaccaggtcgaccacagcttctacgtcgattggcagaccgagaccggcgac
ggtcccggctatgtcaccatcaccaagcgcctgcgcggctcgccgatggacaagctggtc
gccgagctgatgatcctggccaactccacctggggcaagctactcgacgaagccggcgtg
cccggcctctatcgcgtgcagagcggcggcaaggtgcgcatgacgacggtggccggcccg
cacgaaggcctgggcgtggattgctacgcctggtcgagttcgccgctgcgccgctatgtc
gacctggtgaaccagtggcagatcatcgcggtgctgcagggcacgccgccggcctttgcg
ccgaagtcggccgaactgatggcggcgctgcgcgacttcgagctcacctacgccgcctac
gccgacttccagcgccagatggagcgctactggtgcctgcgctggctgcgccaggccgcg
gccggtccggtggaagccaccgtgctgcgcgacaacgtggtcaagctcgaagccattccg
ctggtgttcaaggtgccgtcgatgccgctgcagctgccgggcagccgcgtccgcctggtc
gtcgaaggcagcgacctgctcgacgtcgagatccaggcacgcttccaggagatcctttcc
gaacccgatcccgaggattacgtcgagttcgaaggcccttag
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