Azospirillum sp. TSH100: E6C72_25465
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Entry
E6C72_25465 CDS
T09516
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azs03021
]
E6C72_25465 (rpoH)
Transcription machinery [BR:
azs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E6C72_25465 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_3
HTH_25
HTH_35
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QCG91161
UniProt:
A0A4P7YRD5
LinkDB
All DBs
Position
5:4053..4943
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AA seq
296 aa
AA seq
DB search
MATGSNLPAIGSESNLSRYLQEIRKFPMLEPEREYMLAKRWQQHEDSGAAHQLVTSHLRL
VAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRRLKGQMQAIEEGDLSPEQVQAIATKLDVPEQDVVNMNRRL
ASPDHSLNAPLRAESEGEWQDFLVDESASQEITLADREELGKRRKLLANAMTALNERERD
ILTERRLREAPTTLEDLSQKYGISRERVRQIEVRAFEKLQKAIKAAAVEQKMETEA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggggtccaaccttccggcgatcgggtcagagagcaatctgtcccgctatctc
caggagattcgcaagttcccgatgctggagccggaacgggaatacatgctggccaagcgc
tggcagcagcatgaggattccggcgccgcccaccagctcgtcaccagccatctgcggctg
gtggccaagatcgccatgggctaccgcggctacggcctgcctttgtcggagctgatctcc
gaaggcaatgtcggcatgatgcaggcggtgaagcggttcgaccccgaccgcggcttccgg
ctggcgacctacgccatgtggtggatccgcgcggcgatccaggaatacatcctgcacagc
tggtcgctggtgaagatgggcaccaccgccgcccagaagaagctgttcttcaacctgcgc
cggctgaagggccagatgcaggcgatcgaggagggcgacctgtcgcccgaacaggtccag
gcgatcgccaccaagctggacgtgccggaacaggacgtcgtcaacatgaaccggcggctg
gccagccccgaccattcgctgaacgcgcccttgcgggcggagagcgagggcgaatggcag
gatttcctggtggacgagagcgccagccaggaaatcaccctggccgaccgcgaggagctg
ggcaagcgccgcaagctgctggcgaacgccatgaccgcgctgaacgagcgtgaacgcgac
atcctgaccgaacgccgcctgcgcgaggcgccgacgacgctggaggatctgtcgcagaaa
tacggtatcagccgcgagcgcgtccgccagatcgaggtccgcgccttcgagaagctgcaa
aaggcgatcaaggccgccgcggtcgaacagaagatggagaccgaggcgtaa
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