Arthrobacter zhaoxinii: N2K95_02050
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Entry
N2K95_02050 CDS
T09564
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
azx
Arthrobacter zhaoxinii
Pathway
azx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N2K95_02050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azx03019
]
N2K95_02050
03400 DNA repair and recombination proteins [BR:
azx03400
]
N2K95_02050
Enzymes [BR:
azx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N2K95_02050
Messenger RNA biogenesis [BR:
azx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N2K95_02050
DNA repair and recombination proteins [BR:
azx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N2K95_02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
UWX98619
LinkDB
All DBs
Position
425199..427361
Genome browser
AA seq
720 aa
AA seq
DB search
MQGTASDTASNTASESSDTTRALHAEAVQLLRALVGNDSAEFHQDQFEAIEALVSGGRRA
LVVQRTGWGKSAVYFVASLLLRARGAGPTLIVSPLLALMRDQVAAAGRAGVRAEAINSAN
QLEWQDISAKLEADQVDVLLVSPERLNNPGFREQHLPELIRRSGLLVIDEAHCISDWGHD
FRPDYRRIRSLIEQLPSTVPVLATTATANSRVVKDIEEQLAAGGEDVFTIRGPLARKSLR
LGVLRLPNPKARLAWLLTHLDELPGSGIIYALTVSGAEDTARLLQKAGHPVLAYTGRTDP
ADREEAEAALKENRVKALVATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRGTP
NADVLLLPGAEDRDIWQYFATSSMPEEGPATAVLSELASGEVLSVGVLETRVNLKRSPLE
LLLKVLSVDGAVEKVSGGWRGTGQPWHYDRERYERIAAARVKEQQAMLDYESTDGCRMQF
LSQQLDDPAAAPCGRCDNCAGRWFGADVAAEASDNAARALDKVGVEVDPRGMYPSGMDRL
GVPVKGKIKPDRIVSGGRALARLTDLGWGGRLREIFAPGAEDMPVDSALLNGCVQVLAQW
GWAQRPVAIVSIPSRSRPQLVDSLASGLSELGRIPYLGTLQLPHGGPAGGPGGNSAFRLA
SVWDQFAVPPEGAAWFAANPGPVLLVDDFADSRWTLTEAGRVLREAGAEAVLPFVLALKA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcactgcttctgacactgcgtctaacactgcctctgagagttccgacacaacc
cgcgcgttgcacgcggaggcggttcagctgctgcgggcgctggtgggcaatgactccgcc
gagttccaccaggaccagttcgaagccattgaggcgctggtctccggaggccggcgtgcc
ctggtggtgcagcgcaccggctggggaaaatccgccgtgtacttcgtggccagcctgctg
ctgcgggcccgcggcgccggccccacgctgattgtctccccgctgctggccctgatgcgg
gaccaggtggcagccgccgggcgggccggggtccgtgccgaagccatcaactccgccaac
cagctggaatggcaggacatttccgcgaagctggaggcggatcaggtggacgtgctgctg
gtgtccccggagcggctgaacaaccccgggttccgggaacagcacctgccggaactgatc
cggcgctccggactgttggtgattgacgaagcgcactgcatttccgactggggccatgac
ttccgtccggactaccgccgcatccgaagcctgatcgagcagctgccctccacagtgccg
gtgctggccaccaccgccacggccaacagccgtgtggtgaaggacatcgaggaacagctc
gccgccggcggtgaggacgtgttcaccatccgcggcccgctggcccgcaagtccctgcgc
ctcggcgtcctgcggctgcccaaccccaaggcgcgcctggcctggctgctgacgcacctg
gacgagctgccgggcagcgggatcatctacgccctgaccgtgtccggcgccgaagacacg
gcccggctgctgcagaaggccgggcatccggtcctcgcctacacgggccgcaccgatccc
gcggaccgggaagaggccgaggccgcgctaaaggagaaccgggtcaaggccctggtggcc
accagcgcactgggcatgggcttcgacaaacctgatctgggcttcgtgatccacctgggc
gcaccgtcctcgccggtggcgtactaccagcaggtgggccgtgccggccgcggcaccccg
aacgctgacgtgctgctgctgcccggagccgaggaccgcgacatctggcagtacttcgcc
acgtcctccatgccggaggaaggacccgccaccgcggtgctctccgaactcgcgtccggc
gaagtgctgtccgtcggggtgctggagacccgggtcaacctcaagcgctcgccgctggaa
ctgctgctgaaggtcctgtccgtggacggcgccgtcgaaaaggtgtccggcggctggcgc
ggcaccggacagccgtggcattacgaccgggaacgctatgaacggatcgctgctgcccgg
gtgaaggaacagcaggcgatgctcgattacgagagcaccgacggctgccgcatgcagttc
ctgtcccagcagctcgacgatccggcggccgcaccctgcggacgctgcgacaactgcgcg
ggccgctggttcggcgccgacgtcgcggcggaggcttccgacaacgcggcccgggccctg
gacaaggtcggggtggaggtggatccgcgcggaatgtatccctcgggcatggaccggctg
ggcgtgccggtgaagggcaaaatcaagccggaccggatcgtctccggcggccgtgccctg
gcccggctgacggacctgggctggggcggccggctgcgtgaaatcttcgcgcccggtgcc
gaagacatgccggtggactcggcactgctgaacggctgcgtgcaggtgctggcgcagtgg
ggctgggcgcaacgtccggtggccattgtgtccatcccctcccggtcccggccgcagctg
gtggactcgctggccagcggactctcggagctgggccggattccgtatctggggaccctg
cagctgccgcacggcgggcccgccggcggacccggcggcaacagcgctttccggctggcc
tccgtctgggaccagtttgcggttcccccggaaggggctgcttggttcgccgcgaacccc
ggcccggtgctgctggtggacgacttcgcggatagccgctggaccctcaccgaagccggc
cgggtgctgcgcgaagccggggccgaagcggtactgccgttcgtgcttgcgctgaaggcc
tag
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