Burkholderia ambifaria MC40-6: BamMC406_2405
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Entry
BamMC406_2405 CDS
T00684
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bac03009
]
BamMC406_2405
Enzymes [BR:
bac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BamMC406_2405
Ribosome biogenesis [BR:
bac03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BamMC406_2405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACB64883
UniProt:
B1YV79
LinkDB
All DBs
Position
1:2672982..2673698
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AA seq
238 aa
AA seq
DB search
MDLESILYTQGFGSRRQCRGLIETGRVSVAGASATDPDASFDTDGLVFTVDDTAWPFHAR
AYLALNKPAGYECSRDPQHHASVFSLLPAPLVARGVQCVGRLDQDTTGLLLLSDDGQFVH
AYTSPKRKVPKTYVATVRHPLDDTQLNALRAGVQLHGEPKPIAAVAAHARDTHALALTVL
EGKYHQVKRMVAAASNRVEALHRESIGGFTLPVDLAPGAWRWLGERDLSALRDPVKTL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgaaagcattctctacacgcagggcttcggctcgcgccgccagtgccgcggc
ctgatcgaaacgggtcgcgtcagcgtcgcgggcgcgagcgcgaccgaccccgacgcgtcg
ttcgacaccgacggcctcgtattcacggtcgacgacaccgcatggccgttccacgcccgc
gcgtatctcgcgctcaacaagccggccggctacgagtgttcgcgggacccgcaacaccac
gcgagcgtgttcagcctgctgcccgcgccgctcgtcgcccgcggcgtgcagtgcgtcggc
cgcctggaccaggacacgacgggcctgctgctgctgtccgacgacggccagttcgtgcac
gcatacacgtcgcccaagcgcaaggtgccgaagacctacgtcgcgaccgtgcgccacccg
ctcgacgacacccagctgaacgcgctgcgcgccggcgtgcagctccacggcgagccgaag
ccgatcgcggcggtcgccgcccacgcgcgcgacacgcacgcgctggcgctgaccgtcctc
gaaggcaaatatcatcaggtgaaacgcatggtcgccgcggccagcaaccgcgtcgaggcg
ctgcaccgcgaaagcatcggcggcttcacgctgccggtggatctcgcgcccggcgcgtgg
cgctggctcggggaacgcgacctgtcagcgctgcgcgatcccgtcaaaaccctctaa
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