Burkholderia ambifaria MC40-6: BamMC406_4951
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Entry
BamMC406_4951 CDS
T00684
Name
(GenBank) YD repeat protein
Organism
bac
Burkholderia ambifaria MC40-6
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
Motif
Other DBs
NCBI-ProteinID:
ACB67398
UniProt:
B1YZJ8
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All DBs
Position
2:complement(2097457..2101944)
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AA seq
1495 aa
AA seq
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MSDTPNYNEPSGSAQERLDQIAKLEDGEAAKAAEQPFYENLNYGMLGADAGLTAIEGTAA
GLGAAGTALAGGATGGAALGAGAVAAGTVMLPLAIAVGGAWALDKVGVTGWLSKEFTQVG
DALGLTIGRGDPHPACIGDRIAHSSGFMGILAGIAVGVAIGVAVAATVATGGLAGALIVG
ACLAGGLTLGGALASASQSMGSNCGEIVTGSGDVYFEGKKVARVTDLVKCDHHSGVPQPL
VDGSKTVFVNGLPLVRIGHETHCSGKVNSGRNSIWIDKTTGHYGPKNPELTATQEFLAGL
LGGIVGGGVGKFAGKGMREKFRPEPTRSAEQTGIRDENRPKCKDPVDPVSGEMLEIRMDL
AIPGVLPLEFKRRYRTRSDDHGLLGHRWSDNWSQHLTFGGGRFVRFHDGAGLAIGFDAPD
MALNGINLREPRYRLVGSRLEPRIFDRDTRQLRIFTPLIDGGSSRLERIEDLDGNAIVLS
YDPAGRLSGMAHSDGYRLEITYPGRDRRLQRIVLHDADGSFRTLVDYDYQNGMLTHVASF
QFGQFHYAYDAHGWMTQWRDTDQTEVRYQYDTAGRVVETGTQQGYHTGRFIYEAGRTRVI
DVDGEWTYNYDDEGLVTAETDPLGHCTRSEWELGRLMARTDPLGRRTDYRYGDHGQLISI
ADVSGRATRLEYDAEQRFTGATLPDGRRIKLDYDHRSRLISRTEPDGTTTTYRYGSNGEL
LRIVVGDRETRLDYDERLRLAVIELPTGARFRRKIDVLGRVLQETSPDGHVTRFDYADGP
DNPRGLLSAVTRPDGSVWRTRYNSEGLPVEWTDPLGRTIQRAYGPFDLLTASIDAAGHAT
RFEYDHATRLTKVINALGESYTYCYDAAGRLVEEIDWGGRETRYERDPAGRLITKTLPDG
GQWRYSYDAYDRLVQVDAGDVGLAYRYDAAGRLASAEVRGEHPHVTRFAYDRNGRVIGED
QHGELLRHVYDPAGQRRVRMTPRRETEYAYDALGAVTQVGGLTIQRDSLGREIGRRAGEF
VAQQDYDTLGRIRRQIAGPTVAFDALQTDPARAFEQLTRQVYHYDAAGQLERIDTDADRL
TYRRDARGQIVSVESLLQTAEHFRYDAVMNIAAHGRQAPVDTHHYGRGGLPERIGYARYR
YDARGRTIEKTLEQPGFRPKTWQYTWDGLNRIVKVVTPDRGVWLYRYDAFHRRIEKQQLG
GREAVKLLWDGSTLAERWIEQRDGTTGQVTTWHIEPGSFSPLAQETNDGLYPILTDQVGR
AKAVFDVRGKTVFKVSHTLWGRVMQVRGAANDDDAVSIDATLRFPGQWCDEETGLHYNLH
RYYDPDSAQYLSVDPLGLAGGFRTQGYVHEPSQWVDPFGLQQCPEREVNGTKIYGKGQKD
GTPGHDQFSEVVANKLAMSGKFKEIYLNRSYNFASDNAVSARRPDIMAVDINGRVHAIEM
ASRTDMGAKLRTLTTRNYDAMQNLPPNARGDILVFEHPYDAQSIKTDLDNLISGI
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacgccgaattacaacgagcccagcggcagcgcacaagaacgtctcgatcag
atcgccaagctggaagacggtgaagccgccaaagcggccgagcagccgttttacgagaat
ctcaactatgggatgctcggtgccgatgcaggcctgaccgcgattgaggggaccgccgcc
gggttgggtgcggcgggtacggcgttggcaggcggtgcaactggtggagcggcattgggc
gcaggtgcggtcgccgcgggtacggtgatgctgccgctcgcgattgcagtcggcggagct
tgggcgctcgacaaagtcggtgttaccggctggctctcaaaggagtttacgcaggtcggt
gacgcacttggcctcacaatcggccgcggcgatccacaccccgcatgcattggcgaccgg
attgcacactcgtcgggcttcatgggaatcctcgccggtatcgccgtgggggtcgcgatc
ggcgtggcggtggcagccaccgtggcgacgggaggactcgccggggcgttgatcgtcggg
gcgtgcttggcgggcggcctgactctcggtggcgcacttgcgtctgccagccaaagtatg
ggcagtaactgtggtgagattgtcaccggctcgggcgatgtgtactttgaaggcaaaaag
gtggcgcgcgtcacggacctggtgaaatgcgatcaccattccggcgtgccgcagccactc
gtcgatggcagcaagacagtgttcgtcaacggcctgccgctggtacggatcggtcacgag
actcactgtagcggcaaggtcaattcggggcgcaacagtatctggatcgacaagacgact
gggcactatggcccgaagaacccggagttgaccgcgactcaggaattcctggcggggttg
ctcggcgggattgtaggcggcggagtcggaaaatttgccggcaaggggatgcgcgaaaaa
ttcaggccggagccgacccggtccgctgaacagacgggcatcagggatgagaaccgaccg
aagtgcaaggatccggttgatccggtatccggtgaaatgctggaaatccgcatggacctc
gccattcccggcgtcctgccgcttgagttcaaacgacgctatcggactcggtcggacgat
catggattgctcggtcaccgctggtcggacaactggtcgcagcatttgacattcggcggt
ggtcgcttcgtcagatttcacgatggagcgggtcttgcgatcggcttcgacgcgccggac
atggcgctcaacggcatcaacttgcgcgaaccgcgctatcggctggtcggaagccgactt
gaaccgcggatcttcgatcgcgatacgcggcaactgcgtattttcacgcctcttatcgac
ggagggtcttcgcgcctcgagcggatcgaggacctcgacggtaacgcaatcgttctttcc
tacgatcctgctggccgtttgagtggcatggcccatagcgatggctatcggcttgagatt
acctatcccgggcgcgaccggcggctgcaacggatcgtcctccacgatgcggacgggagt
ttccgaacactcgtggactacgactaccagaacggcatgcttacccacgtggcgagcttc
cagtttgggcagttccattacgcgtacgatgcgcacggctggatgacccaatggcgggat
actgaccagaccgaagtccgatatcaatacgacaccgccggccgtgtagtcgagaccggt
acacagcagggctatcacacgggccggttcatctacgaagccggccgcactcgcgtgatc
gatgtcgacggcgaatggacctacaactatgacgacgaaggtcttgtaacggccgaaacc
gatccgcttggccattgcactcgctcggaatgggagctcggtcgtttgatggcacggacc
gatccgcttggacgacggaccgactatcgctatggcgatcacggtcagttgatttcgata
gctgacgtgtcagggcgagcgacccggctggaatatgatgccgagcagcgcttcaccggc
gctacgctgcccgatggtaggcggatcaagctcgactacgatcatcggagtcgattaatt
tcgcgcaccgagccggatggcaccacgacgacctaccgctacggatcgaacggtgagctg
ttgcgcatcgttgtcggtgaccgcgagacgcgcctcgactacgacgagcggttacgactt
gccgtcatcgaactgccgaccggtgcgcgcttccggcgcaagatcgacgtgttgggccgg
gtgctgcaggaaacgtcgcccgatggccatgtgacccgcttcgactatgccgatggacct
gacaatccgcgaggtctgctgagcgcggttacgcgtcccgatggctctgtgtggcgaacc
cgatacaacagcgagggtctgccggtcgaatggaccgatccgctcggccgtacgattcag
cgagcgtatggtccgtttgatttgctcacggcgtcgatcgacgcggcgggacatgccacg
cgtttcgagtacgaccacgcgacccgtttgacgaaggtcatcaacgccctgggtgaatcg
tacacatactgctacgacgcggccggtcgtctcgtggaagagattgattggggaggccgc
gagactcggtacgagcgcgatcctgctggtcgcctgataaccaagacgttgccggacggt
ggtcagtggcgctattcgtacgatgcgtacgataggctcgtccaggtagacgcgggtgac
gtggggcttgcctaccgttacgacgcggccgggcgactggcatcggcggaagttcgaggc
gagcaccctcacgtgacccgctttgcttacgataggaacggacgggtgatcggcgaggat
cagcatggcgaactgttgcggcacgtctacgatcctgctggacagcggcgcgtgcggatg
acgcctcgtcgggaaacggagtatgcatatgatgcgttgggtgccgtgacacaggtgggc
ggcctaacgattcagcgcgacagcctgggacgggagatcggtcggcgagcgggggagttt
gttgcgcagcaagactacgacaccctcggccgaattcgccgacaaatcgcgggccctacc
gtagcgttcgacgccttgcaaaccgatccagcccgtgcgttcgagcaattgacgcggcag
gtctatcactacgacgcggccggacaactggagcggatcgataccgacgccgataggctc
acataccggcgtgatgcacgtggccagatcgtctcagtggaaagtctgctacagactgcc
gagcacttccgttacgacgcggtgatgaacattgccgcgcatgggcggcaagctcccgtg
gatacgcatcattacggccgagggggcttgccggagcgaatcggttatgcgcgctatcgg
tacgacgcacgcggccgcacaatcgagaagaccctcgaacagcccgggtttcggccgaag
acgtggcaatacacgtgggatggcctcaaccggatcgtaaaggtcgtgacacccgaccgt
ggcgtttggctataccgctacgatgccttccatcgccggatcgagaagcagcaactcggc
ggtcgcgaagcagtgaagttgctctgggacggttcgacgctagccgagcgctggattgag
cagcgggacggtacgacgggacaggtgacgacgtggcatatcgagccaggaagcttctcc
cccttggcacaggagacaaatgatggtctctaccctatcttgaccgatcaggttggtcgg
gcgaaggcggtattcgacgtgcgtggcaagacggtcttcaaagtgtctcatacgctctgg
gggagagtgatgcaggtacgaggcgccgctaacgacgacgatgccgtatcgatcgatgcg
acattgaggtttccgggacaatggtgtgacgaggaaaccggcctgcactacaacctgcat
cgctattacgacccggactcagcgcagtacctgagcgttgacccgctcggacttgcaggc
ggattccggacccagggctatgttcatgaacccagccagtgggtcgatccgttcggttta
cagcaatgcccggaacgagaagtcaatggaacgaagatatacggcaaggggcaaaaggac
ggaacacctggacacgaccagttctcagaagtggtcgctaacaagctcgcgatgagtggg
aaattcaaggaaatctatctgaaccgatcctacaattttgcgagcgacaatgctgtttcg
gcgcggcgccccgatattatggctgtagacattaatgggagagtgcatgccatcgaaatg
gcgtcccggaccgatatgggtgcgaaattgcgaacgctaacgacgcgaaactatgacgcg
atgcaaaatcttccgccgaatgcgcgaggggatattcttgtgtttgaacatccgtatgat
gcgcaatcgataaagactgatctggataatttaatatcgggaatctga
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